DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and ube2n

DIOPT Version :10

Sequence 1:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_989375.1 Gene:ube2n / 395006 XenbaseID:XB-GENE-943749 Length:152 Species:Xenopus tropicalis


Alignment Length:144 Identity:70/144 - (48%)
Similarity:92/144 - (63%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVA 68
            :||.||.|.|..:|.....|.|..::..::...|.||.|||::||.|.|.:..|.:||...|||.
 Frog     6 RRIIKETQRLLAEPVPGIKAEPDENNARYFHVLIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVR 70

  Fly    69 FTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREK 133
            |.|:|||||::..|.||||||:.:|||||.|..|||||.:||..|||||||..::|..:||:..:
 Frog    71 FMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135

  Fly   134 YNELAREWTRKYAM 147
            ..|.||.|||.:||
 Frog   136 AIETARAWTRLHAM 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 68/140 (49%)
ube2nNP_989375.1 UBCc_UBE2N 4..147 CDD:467433 68/140 (49%)

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