DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and Ube2d1

DIOPT Version :10

Sequence 1:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001102000.1 Gene:Ube2d1 / 361831 RGDID:1307886 Length:147 Species:Rattus norvegicus


Alignment Length:147 Identity:131/147 - (89%)
Similarity:140/147 - (95%) Gaps:0/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPP 65
            ||||||.|||.||.|||||.|||||||||||||||||||||||.|||||||||:|||||||||||
  Rat     1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPP 65

  Fly    66 KVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 130
            |:||||:||||||||||||||||||||||||||:||||||||||||||||||||||:||:|||:|
  Rat    66 KIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSD 130

  Fly   131 REKYNELAREWTRKYAM 147
            :||||..|||||:||||
  Rat   131 KEKYNRHAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 125/141 (89%)
Ube2d1NP_001102000.1 UBCc_UBE2D 3..145 CDD:467412 125/141 (89%)

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