DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and UbcE2H

DIOPT Version :9

Sequence 1:NP_001262578.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_572438.1 Gene:UbcE2H / 31728 FlyBaseID:FBgn0029996 Length:183 Species:Drosophila melanogaster


Alignment Length:118 Identity:44/118 - (37%)
Similarity:73/118 - (61%) Gaps:4/118 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWS 94
            ||  ....||.::||:|||:.:.::.|.:||||.|.:.|..:||||||: |:|::|||::...|:
  Fly    34 FH--VKFFGPTETPYEGGVWKVRVYLPDNYPFKSPSIGFVNKIYHPNIDESSGTVCLDVINQAWT 96

  Fly    95 PALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 146
            ....:|.:..| :..||..|||.|||..:.|.:|..:.|:|:....::.::||
  Fly    97 ALYDLSNIFESFLPQLLTYPNPVDPLNRDAAALYLHEPEEYHRKVADYVQRYA 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_001262578.1 UBCc 1..146 CDD:412187 42/116 (36%)
UbcE2HNP_572438.1 COG5078 1..149 CDD:227410 42/116 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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