DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and ubc4

DIOPT Version :10

Sequence 1:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_595283.1 Gene:ubc4 / 2540083 PomBaseID:SPBC119.02 Length:147 Species:Schizosaccharomyces pombe


Alignment Length:147 Identity:128/147 - (87%)
Similarity:135/147 - (91%) Gaps:0/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPP 65
            |||||||:||.|||:|||:.||||||||||||||||||||.||||.||||||:||||||||||||
pombe     1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPP 65

  Fly    66 KVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 130
            ||.||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||.:||||
pombe    66 KVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTD 130

  Fly   131 REKYNELAREWTRKYAM 147
            |.:|...|||||||||:
pombe   131 RSRYELSAREWTRKYAI 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 123/141 (87%)
ubc4NP_595283.1 UBCc_UBE2D 3..145 CDD:467412 123/141 (87%)

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