DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and Ube2d1

DIOPT Version :10

Sequence 1:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001408209.1 Gene:Ube2d1 / 216080 MGIID:2384911 Length:186 Species:Mus musculus


Alignment Length:186 Identity:131/186 - (70%)
Similarity:140/186 - (75%) Gaps:39/186 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKRINK---------------------------------------ELQDLGRDPPAQCSAGPV 26
            ||||||.|                                       ||.||.|||||.||||||
Mouse     1 MALKRIQKVSGCQNRPGCPQDVPRNPGRTVWEGRGHWGGRGTDRPAQELSDLQRDPPAHCSAGPV 65

  Fly    27 GDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRS 91
            |||||||||||||||||.|||||||||:||||||||||||:||||:|||||||||||||||||||
Mouse    66 GDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRS 130

  Fly    92 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM 147
            |||||||:||||||||||||||||||||||:||:|||:|:||||..|||||:||||
Mouse   131 QWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 125/180 (69%)
Ube2d1NP_001408209.1 UBCc_UBE2D 44..184 CDD:467412 120/139 (86%)

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