DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and let-70

DIOPT Version :9

Sequence 1:NP_001262578.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_502065.1 Gene:let-70 / 178006 WormBaseID:WBGene00002344 Length:147 Species:Caenorhabditis elegans


Alignment Length:147 Identity:142/147 - (96%)
Similarity:146/147 - (99%) Gaps:0/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPP 65
            ||||||.||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||
 Worm     1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPP 65

  Fly    66 KVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Worm    66 KVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD 130

  Fly   131 REKYNELAREWTRKYAM 147
            ||:||:||||||:||||
 Worm   131 RERYNQLAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_001262578.1 UBCc 1..146 CDD:412187 139/144 (97%)
let-70NP_502065.1 UBCc 1..146 CDD:412187 139/144 (97%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159830
Domainoid 1 1.000 289 1.000 Domainoid score I842
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2506
Inparanoid 1 1.050 307 1.000 Inparanoid score I1579
Isobase 1 0.950 - 0 Normalized mean entropy S23
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 1 1.000 - - FOG0000418
OrthoInspector 1 1.000 - - oto17483
orthoMCL 1 0.900 - - OOG6_100671
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2321
SonicParanoid 1 1.000 - - X311
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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