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Protein Alignment eff and ubc-1
DIOPT Version :9
Sequence 1: | NP_001262578.1 |
Gene: | eff / 41785 |
FlyBaseID: | FBgn0011217 |
Length: | 147 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001379774.1 |
Gene: | ubc-1 / 177170 |
WormBaseID: | WBGene00006701 |
Length: | 192 |
Species: | Caenorhabditis elegans |
Alignment Length: | 137 |
Identity: | 54/137 - (39%) |
Similarity: | 92/137 - (67%) |
Gaps: | 0/137 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 KRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVA 68
:|:.::.:.|..||||..|..|..|::..|:|.|.||.::|::.|.|.|::.|..:||.|||.|.
Worm 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVK 71
Fly 69 FTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREK 133
|.::::|||:.::||||||||:::|||...::.:|.||.|||.:|||:.|.....|::|:.:|.:
Worm 72 FISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRRE 136
Fly 134 YNELARE 140
|.:..::
Worm 137 YEKRVQQ 143
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
eff | NP_001262578.1 |
UBCc |
1..146 |
CDD:412187 |
54/137 (39%) |
ubc-1 | NP_001379774.1 |
UQ_con |
8..145 |
CDD:395127 |
54/136 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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