DRSC/TRiP Functional Genomics Resources

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Protein Alignment eff and ube2c

DIOPT Version :9

Sequence 1:NP_001262578.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001095283.1 Gene:ube2c / 100124324 XenbaseID:XB-GENE-971108 Length:179 Species:Xenopus tropicalis


Alignment Length:144 Identity:54/144 - (37%)
Similarity:81/144 - (56%) Gaps:7/144 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVA 68
            ||:.:||..|........||.|..|:||.|..||.|...:.|:...:.|::.||:.||:..|.|.
 Frog    33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYESLRYKLSLEFPSGYPYNAPTVK 97

  Fly    69 FTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTD--- 130
            |.|..:|||::|:|:||||||:.:||....:..:|||:.|||.:||.:.||.|..|.:::..   
 Frog    98 FVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAY 162

  Fly   131 ----REKYNELARE 140
                .|:|.:..||
 Frog   163 KKHLHEQYQKQVRE 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
effNP_001262578.1 UBCc 1..146 CDD:412187 54/144 (38%)
ube2cNP_001095283.1 UQ_con 34..170 CDD:365926 50/135 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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