DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7530 and Paqr8

DIOPT Version :9

Sequence 1:NP_650387.1 Gene:CG7530 / 41784 FlyBaseID:FBgn0038256 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001014121.1 Gene:Paqr8 / 316275 RGDID:1311710 Length:354 Species:Rattus norvegicus


Alignment Length:310 Identity:68/310 - (21%)
Similarity:111/310 - (35%) Gaps:87/310 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PNILGHGPNYDDKLSKFKWLCNFDDAPSHLKFNPYIRRGYRTFLPSTKMCLQSIFWWTNETINIW 121
            |.||..|      |.|........|.|...: .|||..|||......:....|:|...||.:|:|
  Rat    23 PKILEEG------LPKMPCTVPETDVPQLFR-EPYIHAGYRPTGHEWRYYFFSLFQKHNEVVNVW 80

  Fly   122 SH-LAGCILFIGLTIF----DLQFLRLHASLSDQVLVVCLLVCFCLCMLMSAIYHIFSCKSEEHY 181
            :| ||...:.:....|    .||:...|.  ...:|.:...:.:..|.|::   |:...|||..:
  Rat    81 THLLAALAVLLRFWAFVEAGALQWASPHT--LPLLLFILSSITYLTCSLLA---HLLQSKSELSH 140

  Fly   182 ELFLSVDFLGISLSLVAIYISGMYYA--------FW------------------CHT-------- 212
            ..|..||::|:|:......::..:|:        ||                  |:.        
  Rat   141 YTFYFVDYVGVSVYQYGSALAHFFYSSDQAWYERFWLFFLPAAAFCGWLSCAGCCYAKYRYRRPY 205

  Fly   213 -FLRTLYSTIALGM-FALAIAVQIPRLNVSMNGKVAVLLLWSAYGIIPLGHWAVA---MGGLENE 272
             .:|.:...:..|: |.|.|:                          |:.| .||   :.|.:.:
  Rat   206 PVMRKICQVVPAGLAFILDIS--------------------------PVAH-RVALCHLAGCQEQ 243

  Fly   273 LVRLMVPRIVLMYLLCLVAFVFYAAKIPERWFTGKVDFVGHSHNWWHLII 322
            .....    .|..|..||:..|::..:||::|.|..|.|||.|..:|..:
  Rat   244 AAWYH----TLQILFFLVSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7530NP_650387.1 HlyIII 111..329 CDD:281059 53/256 (21%)
Paqr8NP_001014121.1 HlyIII 70..297 CDD:397239 53/256 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1524940at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.