DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kibra and herc5.1

DIOPT Version :9

Sequence 1:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_017211386.1 Gene:herc5.1 / 559981 ZFINID:ZDB-GENE-090311-56 Length:884 Species:Danio rerio


Alignment Length:676 Identity:132/676 - (19%)
Similarity:239/676 - (35%) Gaps:226/676 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 QLESDKDRILLIQEKEKLLN---DLNSISLKSRSEEEKRVIHQTRHK---LEEDLKEAYEA---- 423
            |.|..||....|::.:|:.:   .||...||:|.:..    :||..:   |:..|.|:..|    
Zfish   266 QCECGKDPRKAIKDLKKVFSSAASLNGSFLKTRHDGH----YQTSEEYCGLDFGLVESSIATLSR 326

  Fly   424 NNTCVANRLRFHEEKQLLLDKL------QEALKSTKLLEERLKSFSSESTFSISSGSSLGSLSTA 482
            |...::..|:..:|.  ||..|      :|:|:...||.|.:....||....::  .:|.|....
Zfish   327 NERLISTVLKVLQES--LLPTLNPNPTGEESLRLYILLPELISHLKSEQKAELT--EALASKILN 387

  Fly   483 SSKSALSFTDIYIDPFAVDSPIDVVDLRRRS----------------------------QRLFQ- 518
            .|.:||...:||......|...::|.|.:::                            ||::| 
Zfish   388 LSPAALRVLEIYWSKLPDDWLKNLVKLFKKASAKFFGRIIVENVNNVAKTHMLKFVEILQRVYQV 452

  Fly   519 -----QHQQQRLHPVHPV-----LQQQQSAEVTLS-PRSSLSMETPPASPMKYNAGADQTPQALK 572
                 ::.::|...:|.|     :.|..:|:|..: |..:|:.:. .|...:.|| .::|.:.|.
Zfish   453 CCSANRNIKKRYFIIHEVNNLLDVLQTMNADVNNNWPWFNLTGQI-HALEAQRNA-YEETFRKLT 515

  Fly   573 EEPTYANALPAPPAYTAPPPVPISGVRARPYD--LDSTVLDCMMLEAKLQKLNMGTPLNLA---- 631
            ..|...| |.|..:|          :|.|.:.  .:.||....:||..|..||.||..:|.    
Zfish   516 SFPCIFN-LEAKCSY----------MRNRVWKGRFELTVRRTALLEDCLCLLNPGTQQHLRDKWL 569

  Fly   632 -------VAPLSPISEKPSLLDLPQEMLSRSSS----TSNTRSV--------------------S 665
                   |:..:.:.::...|::.:|:...:|.    ..|...:                    .
Zfish   570 SILFTENVSKRTDVHKRDFFLNVFKELCDPASQLFMYNDNETMIWFPAKLTVEKKKYFLFGILCG 634

  Fly   666 AAVSNESVAGDSGVFEASRAHLP-----RKELAQVQIGLK-YLKQEGV----LVVSLERANNLL- 719
            .|.:|.||           .:||     .|:|..::..|: :::...|    |...||.:|::| 
Zfish   635 LAFNNSSV-----------VNLPFPLALFKKLLNIKPSLEDFIEFNPVHGRSLQYILEYSNDVLE 688

  Fly   720 -------ALWTAS------ADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVPITLDKL 771
                   .:|:.|      |:..|         :..||.|||.:.::...:||.  :|....::.
Zfish   689 ESSLPLTIIWSGSELDLDPAEPEQ---------HITTSNRTKFVDEYVDHIFNQ--SVKEAFEEF 742

  Fly   772 ---LTKSLQVTVVTMTGQKEEIIGTVQISMAEFNPEDSTLKWYNVLSSK---------------- 817
               ..:..:..:|.|. :.||:.| |.:...|::        :|:|...                
Zfish   743 RRGFFRGCEKRLVEMF-EPEELRG-VLVGNEEYD--------WNILKQNTTYEGVFNADHPVIIS 797

  Fly   818 ------------------FIPSFESLDIPSTSAAAAAAAVAASNAPNPGNNREESSDESTITSSQ 864
                              |:..||.:.|...||........|       |:.|:...|       
Zfish   798 FWEVFDDLTPNEKKSFLLFLTGFERVPILGMSAVKMRVTHLA-------NSTEDHLPE------- 848

  Fly   865 TSTLTRN---QAPCMELQEQMAAELL 887
              |||.:   |.|..|.:|.:.|:::
Zfish   849 --TLTCHSLLQLPKYEKRETLRAKVI 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kibraNP_001034055.1 WW 57..87 CDD:238122
WW 103..132 CDD:278809
C2_Kibra 693..813 CDD:176062 26/141 (18%)
herc5.1XP_017211386.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.