DRSC/TRiP Functional Genomics Resources

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Protein Alignment kibra and Nedd4

DIOPT Version :9

Sequence 1:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster


Alignment Length:616 Identity:143/616 - (23%)
Similarity:220/616 - (35%) Gaps:217/616 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQTASQSQHHLHPHHLRPQQQQQQH----HHHHQQQQQQQHTHHQQQQQ------HHSDF----- 54
            ::...|.|.|:..|..|.|||||..    ..|.||:.|.:...||||.:      .|:|.     
  Fly   436 ERRRQQMQLHIQQHQQRQQQQQQNRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHNPSD 500

  Fly    55 -----------------------------PLPDGWDIAKDFDGKTYYIDHINKKTTWLDPRDCYT 90
                                         |||..|.:....:|:|::|||.:::|||:|||:...
  Fly   501 ISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRA 565

  Fly    91 KP---QT--FEDCVGDELPMGWEESYDPNIGPYYINHLAQSTQLEDPRQEWKTVQEQML---SDY 147
            .|   ||  .||.:| .||.||||....:...:||:|..::||.||||.....:..|.:   .||
  Fly   566 SPMPNQTRRVEDDLG-PLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQAVPYSRDY 629

  Fly   148 LSAAQDQLENKREMFDVKQQRLLWAQEEYNHLKLAASRSSLCSSS----SSMSRHDPELLRADLM 208
                    :.|.|.|   :..:.......|..::...|:|:...|    ||:::.|  ||:..|.
  Fly   630 --------KQKYEYF---KSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTD--LLKTKLW 681

  Fly   209 -------------LARERVHQLKQELTHITNDISYTERGMNTLYSVGE---------KINARENG 251
                         ||||..:.|.:|:             .|..|.:.|         :||.....
  Fly   682 VEFEGETGLDYGGLAREWFYLLSKEM-------------FNPYYGLFEYSAMDNYTLQINNGSGL 733

  Fly   252 CYD--------------IAEVHA-------IR---EEMLKVHKSLVSGEKVREELMRSLVQIKNE 292
            |.:              :|..|.       ||   :.||:....|...|.|..|...||:.||  
  Fly   734 CNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIK-- 796

  Fly   293 LGRQQISEENS----DLASPFDRVCVASQTDLCG--SSGENLNGGARFAEMAKTKWQY----AEW 347
                    ||.    :|....|.       |:.|  |..|...|||......:.|.:|    .||
  Fly   797 --------ENDPRILELTFCLDE-------DVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEW 846

  Fly   348 RKHIKKLQQQLADHVE---RIEPGQLESDKDRILLIQEKEKLLNDLNSISLKSRSEEE------- 402
            | .:.::::|::..::   .|.|..|....|.    .|.|.|:..:.:|.:|...|..       
  Fly   847 R-FVARVKEQMSSFLDGFGSIIPLNLIKIFDE----HELELLMCGIQNIDVKDWRENTLYKGDYH 906

  Fly   403 ----------KRVI---HQTRHKLEE-----------DLKEAYEAN------------------- 424
                      :.|:   ::.|.:|.:           ..||.|.:|                   
  Fly   907 MNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRA 971

  Fly   425 NTCVANRLRF--HEEKQLLLDKLQEALKSTK 453
            :||. |||..  :|....|.|||.:|::.::
  Fly   972 HTCF-NRLDLPPYEGYLQLKDKLIKAIEGSQ 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kibraNP_001034055.1 WW 57..87 CDD:238122 12/29 (41%)
WW 103..132 CDD:278809 12/28 (43%)
C2_Kibra 693..813 CDD:176062
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999
WW 248..277 CDD:278809
WW 531..560 CDD:278809 11/28 (39%)
WW 581..613 CDD:197736 14/31 (45%)
HECTc 650..1003 CDD:238033 80/390 (21%)
HECTc 674..1003 CDD:214523 75/366 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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