DRSC/TRiP Functional Genomics Resources

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Protein Alignment kibra and smurf1

DIOPT Version :9

Sequence 1:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster
Sequence 2:NP_001001943.1 Gene:smurf1 / 321695 ZFINID:ZDB-GENE-040426-2744 Length:731 Species:Danio rerio


Alignment Length:566 Identity:122/566 - (21%)
Similarity:201/566 - (35%) Gaps:146/566 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PQQQQQQHHHHHQQQQQQQHTHHQQQQQH-HSDFPLPDGWDIAKDFDGKTYYIDHINKKTTWLDP 85
            |.|:|:......:.|..:.|||..|.:.| |....||:|::......|:.|::......:||.||
Zfish   200 PNQEQRLQAQRIRNQDSRGHTHTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDP 264

  Fly    86 RDCYTKPQTFEDCVGDE---LPMGWEESYDPNIGPYYINHLAQSTQLEDPRQEWKTVQEQMLSDY 147
            |    .|:.......:|   ||.|.|.....:...|:::|..::||..|||......|...:.:.
Zfish   265 R----IPRDLNSVSCEELGPLPPGREIRSTVSGRIYFVDHNNRTTQFTDPRLHHIMSQHSQVKES 325

  Fly   148 LSAAQDQLENKREMFD----------------VKQQRLLWAQEEYNHLKLAASRSSLCSSS-SSM 195
            ..|...|:|...|..|                |.:..|...|.:..|.::..||..:...| ..:
Zfish   326 SQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQI 390

  Fly   196 SRHDPELLRADLM-------------LARERVHQLKQELTH-----------------ITNDISY 230
            .:..|:.|:..||             :|||.::.|..|:.:                 |..|.|.
Zfish   391 MKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSI 455

  Fly   231 TERGMNTLYSVGEKINARE------NGCYDIAEVHAIREEMLKVHKSLVSGEKVREELMRSLVQI 289
            ....::..:.||..:....      ||.:.:    ...:::|.....|...|.|..||.:|||.|
Zfish   456 NPDHLSYFHFVGRIMGLAVFHGHYINGGFTL----PFYKQLLGKPIQLCDLETVDPELHKSLVWI 516

  Fly   290 KNELGRQQISEENSDLASPFDRV-CVAS-------QTDLCGSSGENLNGGARFAEMAKTKW--QY 344
            .          || |:.|..|.. ||..       |.:| ..:|:|:    ...|..|.::  .|
Zfish   517 L----------EN-DITSVLDHTFCVEHNAFGKFLQHEL-KPNGKNI----PVTEENKKEYVRLY 565

  Fly   345 AEWRKHIKKLQQQ---LADHVERIEPGQLESDKDRILLIQEKEKLLNDLNSISLKSRSEEEKRVI 406
            ..|| .::.::.|   |......:.|..|....|.    :|.|.::..|..|.|..         
Zfish   566 VNWR-FMRGIEAQFLALQKGFNELIPQHLLKPFDN----KELELIIGGLGKIDLND--------- 616

  Fly   407 HQTRHKLEEDLKEAYEANNT---CVA--NRLR--------FHEEKQLLLDKLQEALKSTKLLEER 458
                          ::||..   |||  |.::        |.||::..|  ||....||::   .
Zfish   617 --------------WKANTRLKHCVADSNIVKWFWQAVESFDEERRGRL--LQFVTGSTRV---P 662

  Fly   459 LKSFSSESTFSISSGSSLGSLSTASS------KSALSFTDIYIDPF 498
            |:.|.:....:.|:|..|.::....:      |:...|..|.|.|:
Zfish   663 LQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPY 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kibraNP_001034055.1 WW 57..87 CDD:238122 8/29 (28%)
WW 103..132 CDD:278809 8/28 (29%)
C2_Kibra 693..813 CDD:176062
smurf1NP_001001943.1 C2_Smurf-like 14..138 CDD:176028
WW 234..266 CDD:197736 10/35 (29%)
WW 280..312 CDD:197736 10/31 (32%)
HECTc 373..728 CDD:238033 79/389 (20%)
HECTc 397..728 CDD:214523 75/365 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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