DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kibra and wwc3

DIOPT Version :9

Sequence 1:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster
Sequence 2:XP_002932841.2 Gene:wwc3 / 100127609 XenbaseID:XB-GENE-5928407 Length:1196 Species:Xenopus tropicalis


Alignment Length:1271 Identity:378/1271 - (29%)
Similarity:607/1271 - (47%) Gaps:222/1271 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RPQQQQQQHHHHHQQQQQQQHTHHQQQQQHHSDFPLPDGWDIAKDFDGKTYYIDHINKKTTWLDP 85
            |.||||||......:||:.........::..|:.|||.||:.|:|:||:.:||||..::|:|:||
 Frog    11 RRQQQQQQQPQAPSEQQRCPSPGPSSCRRGSSELPLPAGWEEARDYDGRVFYIDHNTRQTSWIDP 75

  Fly    86 RDCYTKPQTFEDCVGDELPMGWEESYDPNIGPYYINHLAQSTQLEDPRQEWKTVQEQMLSDYLSA 150
            ||..|||.||.||||:|||:|||...|..||.||::|:.|.||:||||::|:..||:||.:||..
 Frog    76 RDRITKPLTFADCVGNELPLGWEIVRDQQIGVYYMDHINQLTQVEDPREQWRREQERMLKEYLVV 140

  Fly   151 AQDQLENKREMFDVKQQRLLWAQEEYNHLKLAA---SRSSLCSSS--SSMSRHDPELLRADLMLA 210
            ||:.|..|:|::.:||||...||||:..|....   |||.:.|.|  |:.:::||..::|::...
 Frog   141 AQEALNAKKEIYQIKQQRFELAQEEFQQLHDLCEDDSRSYVSSFSGFSANTKYDPYQIKAEIANR 205

  Fly   211 RERVHQLKQELTHITNDISYTERGMNTLYSVGEKINARENGCYDIAEVHAIREEMLKVHKSLVSG 275
            |:|:.:||:|||.:..::.|.|:|:.||..:..|:::.... |.:.|..||..|:..:.:::..|
 Frog   206 RDRLSRLKRELTVMKQELQYKEKGVETLQEIDRKMSSAHTN-YKLDEAQAIMSELRTLRQAICMG 269

  Fly   276 EKVREELMRSLVQIKNEL-----------GRQQISEENSDLASPFDRVCVASQTDLCGSSGENLN 329
            ||.|.:||:||.::.:..           |.|..|...:|...|.......||||..|..|  .:
 Frog   270 EKERRDLMQSLAKLTDGFRNSCCISDSLYGAQHNSGSLTDSCLPQQYCDACSQTDNIGEFG--FD 332

  Fly   330 GGARFAEMAKTKWQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDLNSIS 394
            ..:|.|:..:..|||.|.:|.:..:|.|||.......|...|:|:|.:.||:|||.||.||..|.
 Frog   333 DKSRLADRVRLNWQYEEAKKRVSSIQHQLALLDNETWPVMAEADRDHLQLIKEKEALLQDLQLIC 397

  Fly   395 LKSRSEEEKRVIHQTRHKLEEDLKEAYEANNTCVANRLRFHEEKQLLLDKLQEALKSTKLLEERL 459
            .:.||.|:...:.:...:|.::::.|:..:...:..||...|::..||..|:||.:....|..::
 Frog   398 QQRRSPEDLSRMEEEMRRLSDEIQRAHATSAQGITERLLLQEKRNSLLRCLEEATRLASYLHTQI 462

  Fly   460 KSFSSESTFSISSGSSLGSL-----STASSK---SALSFTDIYIDPFAVDSPIDVVDLRRRSQRL 516
            ||.|: ||.::|||||.|||     |.|||:   |::||||||..|.           ..:::..
 Frog   463 KSLSA-STLTVSSGSSRGSLASSRGSLASSRGSLSSISFTDIYGLPH-----------YEKAETQ 515

  Fly   517 FQQHQQQRLHPVH----------------PVLQQQQ------SAEVTLSPRSSLSMETPPASPMK 559
            .:..||.|...:.                |.|.:|:      .:..:||.|||||..:||:||:.
 Frog   516 VEYGQQMRFDMIPLDALSKDCQYSETGGLPNLNKQKISMDTPQSLASLSSRSSLSSLSPPSSPLD 580

  Fly   560 ---YNAGAD----QTPQALKEEPTYANALPAPPAYTAPPPVPISGVRARPYDL-----DSTVLDC 612
               .:|..|    |..:.|:|..:..:               :..:|.....|     ..|....
 Frog   581 TPFLSASCDSPLTQMSEGLEEIMSIGS---------------LDMIRGNSLTLGEENNQGTSSQT 630

  Fly   613 MMLEAKLQKLNMGTPL--NLAVAPLSPISEKPSLLDLPQEMLSRSSSTSNTR-----SVSAAVSN 670
            .....:.:..|:..||  .|.::..|||.|                 ...||     .|||.:|:
 Frog   631 QGYNTENKGKNLSGPLLSRLQMSAASPIQE-----------------VCTTRLQGACRVSAGLSD 678

  Fly   671 ESVAGDSGVFEASR-----------AHLPRKELAQVQIGLKYLKQEGVLVVSLERANNLLALWTA 724
            :|:..||||||...           .:..:.|..||.:|:.|..:...|:|.:.:..||...:  
 Frog   679 DSLTSDSGVFETLNKRNGNVDDSVLKNSAKNEEPQVHVGIVYDSESECLLVHVLQLKNLSCAF-- 741

  Fly   725 SADNSQVYLRAAL--LPNSLTSIR-TKALGDFQKP-VFNDTFAVPITLDKLLTKSLQVTVVTMTG 785
            .....::::|..|  |.:|..|.. :||| :|..| :||:.|.:|:....|...|||:.:.::..
 Frog   742 FKQGCKIHIRVYLPSLDSSTPSTYCSKAL-EFHMPLMFNEIFQIPMHASILKQSSLQLYICSVCP 805

  Fly   786 Q-KEEIIGTVQISMAEFNPEDST---LKWYNVLSSKFIPSFESLDIPSTSAAAAAAAVAASNAPN 846
            | :|:::|..||.:|::  |.||   |:||.      |..:.|.|....|        ...::..
 Frog   806 QLQEKLLGIAQIGLADY--EGSTEMHLQWYP------IQMYSSTDPQKVS--------EIEDSMQ 854

  Fly   847 PGNNREESSDESTITSSQTSTLTRNQAPCMELQEQMAAELLGLGPLNEPECSDDDDDDEEEELDD 911
            |..|..|     |.|.:.:..|.|..|....::.::|.|.:.|....|.....:..:|:.|.:.:
 Frog   855 PAENVTE-----TKTDAVSILLARTTAQLEAVERELAVERVKLEYTEEEILEMERKEDQTEAISE 914

  Fly   912 K-------------------------------QLVSDVGLMNSSSMLHAYLQNMKQEFADKETNT 945
            :                               |..:..|..|....:..:.:.:|   .||||||
 Frog   915 RSWQAESVDSGCHSNYNQLSPHYSEGCYGDAVQGSAQTGQANLYDPVKTHNEPIK---VDKETNT 976

  Fly   946 DRAY------LPE-----KSRGQSQLMDDRPVKRSQTFTPSEAFSKNRYNCRLNRSDSDSAMHCG 999
            :..:      ||:     :||| |..:....:.|||||:|.   ::::|.|||.||||||:....
 Frog   977 EDVFPDEVTNLPKERTCHRSRG-SPFVRSSTIVRSQTFSPG---ARSQYVCRLYRSDSDSSTLPR 1037

  Fly  1000 VAPHTFQRGAAERRSLRFHSKA-PKSVTKLHHTHIPRTSLDLELDLQAQHSKLYFLNDQIAKLQN 1063
            .:|  |.|...|||:||:..:: ..|:.::    :.||||||||||||..::...||::|..|:.
 Frog  1038 KSP--FIRNTLERRTLRYKQQSCQSSMAEI----MARTSLDLELDLQASRTRQRQLNEEINALRE 1096

  Fly  1064 LKEVLQKACENKDPLVAAWAIENEEFQRLVARAD------PAKCPEERQLQKLLMKTAKEIHKLR 1122
            ||..|::........:..|.:.:|.|:.|:..|:      ..:..:|:..:|:|.|.:|||..||
 Frog  1097 LKHRLEEVQLRGQSDLPQWVLRDERFRSLLLEAERQTRQTKLEHHQEQAAEKMLKKASKEIFHLR 1161

  Fly  1123 --KTKVPKGCPDLVSFKEKITFFTRKGLSVPELPSE 1156
              ..|.|.   .:.:|:|||.||||..:::|.||::
 Frog  1162 GQNQKEPF---QVQTFREKIAFFTRPRINIPPLPAD 1194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kibraNP_001034055.1 WW 57..87 CDD:238122 15/29 (52%)
WW 103..132 CDD:278809 15/28 (54%)
C2_Kibra 693..813 CDD:176062 38/127 (30%)
wwc3XP_002932841.2 WW 46..75 CDD:366073 14/28 (50%)
WW 93..122 CDD:366073 15/28 (54%)
SbcC <109..>458 CDD:223496 114/351 (32%)
C2_Kibra 712..833 CDD:176062 36/125 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2362
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 501 1.000 Inparanoid score I1326
OMA 1 1.010 - - QHG50236
OrthoDB 1 1.010 - - D181722at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49020
Panther 1 1.100 - - O PTHR14791
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1418
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.080

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