DRSC/TRiP Functional Genomics Resources

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Protein Alignment BigH1 and LOC1272577

DIOPT Version :10

Sequence 1:NP_650383.2 Gene:BigH1 / 41780 FlyBaseID:FBgn0038252 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_311486.5 Gene:LOC1272577 / 1272577 VectorBaseID:AGAMI1_000950 Length:284 Species:Anopheles gambiae


Alignment Length:274 Identity:82/274 - (29%)
Similarity:114/274 - (41%) Gaps:68/274 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DGSKLVPPDSDNPKSMVPKPK--------------------GTLISLALMAIGKLASRSGSSVQA 123
            |.:..||..:..|.::...||                    ..:|..||.|   |..|:|||:||
Mosquito    45 DTAMAVPAAAAAPAAVAKTPKKAKAAAGPKKPKKPATHPPVNAMIVAALKA---LKERNGSSLQA 106

  Fly   124 IMTYLKDNGQEWK-DPKKTARLLHRALKLAEANGEVVMVK-----RSFKLTDKQKNSSKAVEKMK 182
            |..|:..|   :| |..|....:.:|||.....|::|..|     .||||:.:.|          
Mosquito   107 IKKYMAAN---YKVDVAKLGPFIKKALKTGVTGGKLVQTKGVGASGSFKLSAEAK---------- 158

  Fly   183 AKKQKEKEKKAKVEKVLKEKIQKKEAKAKMKE-----KKASKEKSSKPTERKTKQAVKKKKPEDG 242
             |...||:|||.|:|       ||.|.|..|:     |||:.||..| ..:|.:.....|||:..
Mosquito   159 -KPVVEKKKKAAVQK-------KKSAAAGDKKKNPATKKAAGEKKKK-VAKKAEGGAAAKKPKAA 214

  Fly   243 TKDNPPASKAASSAAAQAMLETSQTAIPEAGKKPAKTKVKLQADSSEAGKTKKSRKSIGTLAQP- 306
            |....|...||.:..|:.:::.:.||.|:  :|..|...|..|...:..|.||:       |.| 
Mosquito   215 TAAKKPKPAAAKAGGAKKVVKKAATAAPK--QKATKPSKKTGAPKPKTPKPKKA-------AAPA 270

  Fly   307 -KAARP-KVKAVKK 318
             |||.| |..|.||
Mosquito   271 KKAAAPKKATAAKK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BigH1NP_650383.2 Linker_histone 109..162 CDD:459846 19/53 (36%)
LOC1272577XP_311486.5 None

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