DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and Jon99Fi

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_651800.2 Gene:Jon99Fi / 43622 FlyBaseID:FBgn0039778 Length:267 Species:Drosophila melanogaster


Alignment Length:385 Identity:89/385 - (23%)
Similarity:129/385 - (33%) Gaps:160/385 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVVVGSLALGANAQLP---------PINCVAKIPSGRVT-GHCISIRECDYFMRILLSGNLSQSD 62
            |:|..:||:.|...:|         |:..| || .||:| |:.....:..|.:.:|.|||     
  Fly     3 LLVFLALAVAAATAIPTPEQKLVPTPVKDV-KI-QGRITNGYPAYEGKVPYIVGLLFSGN----- 60

  Fly    63 RNLLRDNQCGVRGNDVQVCCPSTAGLGALTHPLLPSDCGKVRWQRSNDTDTRIREFPWLALIEYT 127
                        ||                            |              |       
  Fly    61 ------------GN----------------------------W--------------W------- 64

  Fly   128 RGNQEKIHACGGVLISDRYVLTAAHCV--AQAATSNLQITAVRLGEWDTSTNPDCQY-HEDSKVA 189
                     |||.:|.:.:|||||||.  |...|.|          :..|.....|| |.     
  Fly    65 ---------CGGSIIGNTWVLTAAHCTNGASGVTIN----------YGASLRNQPQYTHW----- 105

  Fly   190 DCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDF---VQPICLPNKQLRADELE 251
                    :.....:.|..||..:..  |||:|:|....    ||   |..:.||:       ..
  Fly   106 --------VGSGNFVQHHHYNSGNLH--NDISLIRTPHV----DFWHLVNKVELPS-------YN 149

  Fly   252 DLVTEVAGWQASSSQRMRKGY-----------------VTISSIEECQRKYASQQLRIQASKLCG 299
            |...:.|||.|.:|     |:                 |.|.|..:|.|.::     :..:.:|.
  Fly   150 DRYQDYAGWWAVAS-----GWGGTYDGSPLPDWLQAVDVQIMSQSDCSRTWS-----LHDNMICI 204

  Fly   300 LTN--SQECYGNAGGPLMLFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHDS 357
            .||  ...|.|::||||:  .::|..|.|:.||..........|.|::||..|:|||.|:
  Fly   205 NTNGGKSTCGGDSGGPLV--THEGNRLVGVTSFVSSAGCQSGAPAVFSRVTGYLDWIRDN 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 11/50 (22%)
Tryp_SPc 111..356 CDD:238113 66/269 (25%)
Jon99FiNP_651800.2 Tryp_SPc 38..262 CDD:238113 76/346 (22%)

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