DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and Jon99Ciii

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster


Alignment Length:241 Identity:66/241 - (27%)
Similarity:99/241 - (41%) Gaps:63/241 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 CGGVLISDRYVLTAAHCV--AQAATSNLQITAVRLGEWDTSTNPDCQY-HEDSKVADCAPPYQDI 198
            |||.:|.:.:|||||||.  |...|.|          :..|.....|| |.             :
  Fly    63 CGGSIIGNTWVLTAAHCTNGASGVTIN----------YGASIRTQPQYTHW-------------V 104

  Fly   199 AIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDF---VQPICLPNKQLRADELEDLVTEVAGW 260
            ...:::.|..||..:..  |||:|:|....    ||   |..:.||:       ..|...:.|||
  Fly   105 GSGDIIQHHHYNSGNLH--NDISLIRTPHV----DFWSLVNKVELPS-------YNDRYQDYAGW 156

  Fly   261 QASSS------------QRMRKGYVTISSIEECQRKYASQQLRIQASKLCGLTN--SQECYGNAG 311
            .|.:|            ..::...|.|.|..:|.|.::     :..:.:|..|:  ...|.|::|
  Fly   157 WAVASGWGGTYDGSPLPDWLQSVDVQIISQSDCSRTWS-----LHDNMICINTDGGKSTCGGDSG 216

  Fly   312 GPLMLFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHDS 357
            |||:  .:||..|.|:.|||.........|.|::||..|:|||.|:
  Fly   217 GPLV--THDGNRLVGVTSFGSAAGCQSGAPAVFSRVTGYLDWIRDN 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 65/238 (27%)
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 65/239 (27%)
Blue background indicates that the domain is not in the aligned region.

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