DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3505 and CG11843

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster


Alignment Length:362 Identity:103/362 - (28%)
Similarity:153/362 - (42%) Gaps:94/362 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CV-AKIPSGRVTGHCISIRECDYFMRI----LLSGNLSQSDRNLLRDNQCGVRGNDVQVCCPSTA 86
            || .:.|...|.|.|...::..:..||    ||.|   .|..:.:.||            |.|..
  Fly    16 CVFGQQPDMDVVGSCSRYKKSVFEERIEFGFLLPG---ASIESRIIDN------------CRSYT 65

  Fly    87 GLGALTHPLLPSDCGKVRWQRSNDTDTRIREFPWLALIEYTRGNQEKIHA---CGGVLISDRYVL 148
            .|....||..|                  ||||.:|.:  .|.......|   |||||||:|:||
  Fly    66 PLIVGGHPAQP------------------REFPHMARL--GRRPDPSSRADWFCGGVLISERFVL 110

  Fly   149 TAAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTD 213
            |||||:   .:...::..|||||.|.          ||...|.||  :|..:...:.||.|.  |
  Fly   111 TAAHCL---ESERGEVNVVRLGELDF----------DSLDEDAAP--RDYMVAGYIAHPGYE--D 158

  Fly   214 RTQINDIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGWQAS------SSQRMR--- 269
            ....:||.||:|......:.:..|.|||.:..|:.:....|    ||.::      |:|.::   
  Fly   159 PQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDSFIAV----GWGSTGLALKPSAQLLKVKL 219

  Fly   270 --------KGYVTISSIEECQRKYASQQLRIQASKLC-GLTNSQE-CYGNAGGPLMLFKND---G 321
                    |..:| ..:||..|.:...      ::|| |...:|: |.|::||||:::..:   .
  Fly   220 QRYGNWVCKKLLT-RQVEEFPRGFDGN------NQLCVGSEMAQDTCNGDSGGPLLMYHREYPCM 277

  Fly   322 YLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHDSL 358
            |::.|:.|.| :.|.:|..|.:||||..|:.||..:|
  Fly   278 YVVVGITSAG-LSCGSPGIPGIYTRVYPYLGWIARTL 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 12/53 (23%)
Tryp_SPc 111..356 CDD:238113 82/269 (30%)
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 85/292 (29%)

Return to query results.
Submit another query.