DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3505 and CG5246

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:249 Identity:70/249 - (28%)
Similarity:111/249 - (44%) Gaps:46/249 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PWLALIEYTRGNQEKIHACGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYH 183
            |:...|..|.|.    |.|||.:|:.:::||||||:...    :|...:..|..| .|.|..:|.
  Fly    54 PYQVSIMNTFGE----HVCGGSIIAPQWILTAAHCMEWP----IQYLKIVTGTVD-YTRPGAEYL 109

  Fly   184 EDSKVADCAPPYQDIAIEELLPH--PLYNRTDRTQINDIALVRLASPAKLNDFVQPICLPNKQLR 246
            .|.....|:             |  |.|:       |||||:..|.|...:|..|||.|.:|. .
  Fly   110 VDGSKIHCS-------------HDKPAYH-------NDIALIHTAKPIVYDDLTQPIKLASKG-S 153

  Fly   247 ADELEDLVTEVAGWQASS-----SQRMRKGYVTISSIEECQRKYASQQLRIQASKLCGLTNSQE- 305
            ..::.|.:| :.||.::.     |.:::|..:.....:.||.:..:... :....:|..|...| 
  Fly   154 LPKVGDKLT-LTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANW-LSEGHVCTFTQEGEG 216

  Fly   306 -CYGNAGGPLMLFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHDSL 358
             |:|::||||:   :....|.|:|::|.. |. ..:|||:..||.|.|||...:
  Fly   217 SCHGDSGGPLV---DANQTLVGVVNWGEA-CA-IGYPDVFGSVAYYHDWIEQMM 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 70/245 (29%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 70/245 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.