DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and CG4053

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster


Alignment Length:285 Identity:79/285 - (27%)
Similarity:113/285 - (39%) Gaps:77/285 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 WLAL----IEYTR---------------GNQE----------------KIHACGGVLISDRYVLT 149
            ||.|    |:.||               |.||                |.|.|.||:::::::||
  Fly     9 WLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILT 73

  Fly   150 AAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDR 214
            |.||....:..:|:|.        ..||            |...|.|.:..:|.|.|.||: ...
  Fly    74 AGHCALDFSIEDLRII--------VGTN------------DRLEPGQTLFPDEALVHCLYD-IPY 117

  Fly   215 TQINDIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGWQASSS-----QRMRKGYVT 274
            ...|||||:.:......||..|.:.|..:|..|..    ...:.||.|..|     |.::...:|
  Fly   118 VYNNDIALIHVNESIIFNDRTQIVELSREQPPAGS----TVTLTGWGAPESSYPTVQYLQTLNLT 178

  Fly   275 ISSIEECQRKYASQQLRIQASKLCGLTNSQE--CYGNAGGPLMLFKNDGYLLGGLVSFGPVPCPN 337
            |.:.|||:.::.... .|....:|..|...|  |.|::|||||.   :|.|: |||::|.. | .
  Fly   179 IIAHEECRERWDFHD-GIDIGHICTFTREGEGACSGDSGGPLMW---EGKLV-GLVNWGRA-C-G 236

  Fly   338 PDWPDVYTRVASYIDWI---HDSLK 359
            ...||:|.....|.|||   |...|
  Fly   237 VGMPDMYANTVYYQDWIRRTHSGCK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 77/280 (28%)
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 71/252 (28%)
Blue background indicates that the domain is not in the aligned region.

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