DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and modSP

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:330 Identity:83/330 - (25%)
Similarity:130/330 - (39%) Gaps:74/330 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GNDVQVCCPSTAGLGALTHPLLPSDCGK-VRWQRSN---DTD-----TRIREF------------ 118
            |.:|:..|  :.|...|: ||....|.| ..|.|..   :.|     |.|::|            
  Fly   319 GTEVKFVC--STGFKTLS-PLPEMRCMKGGYWNRGRQRCEQDCGQLATPIKQFSSGGYTINNTVV 380

  Fly   119 PWLALIEYTRGNQEKIH-ACGGVLISDRYVLTAAHCVAQAAT------SNLQITAVRLGEWDTST 176
            ||...: |...|::..| .|||.|::...|:||||||....|      ...::.|.:.......|
  Fly   381 PWHVGL-YVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAAKFYRNYGET 444

  Fly   177 NPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPICLP 241
            .|: :...|.::.:.||.|:             .||: ....|:||:.|..|.:|:..::|||:.
  Fly   445 TPE-EKRRDVRLIEIAPGYK-------------GRTE-NYYQDLALLTLDEPFELSHVIRPICVT 494

  Fly   242 NKQLRADE--LEDLVTEVAGWQASSSQRMRKGYVTISSIEECQRKYASQQLR-IQASKLCGLT-- 301
            .......|  .:|:..:.|||...:...::.......|...|:|     .|| |||.|.|..|  
  Fly   495 FASFAEKESVTDDVQGKFAGWNIENKHELQFVPAVSKSNSVCRR-----NLRDIQADKFCIFTQG 554

  Fly   302 NSQECYGNAGG------PLMLF---KNDGYLLGGLVSFGPVPCPNPDW----PDVYTRVASYIDW 353
            .|..|.|::||      |...|   ....:.|.|::|    ..||.|.    ..|.|.:..:.|.
  Fly   555 KSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGVIS----NAPNADQCAHSLTVMTNIQHFEDM 615

  Fly   354 IHDSL 358
            |.:::
  Fly   616 ILNAM 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 2/6 (33%)
Tryp_SPc 111..356 CDD:238113 72/286 (25%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 67/269 (25%)
Blue background indicates that the domain is not in the aligned region.

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