DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:289 Identity:85/289 - (29%)
Similarity:123/289 - (42%) Gaps:67/289 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LTHPLLPSDCG---------KVRWQRSNDTDTRIREFPWLALIEYTRGNQEKIHACGGVLISDRY 146
            :...||.:.||         ||    :...|....|:||.|.::     |..:|.||..|||:.:
  Rat   179 IAEDLLNTCCGRRTITPGGHKV----AGGQDAEEGEWPWQASLQ-----QNNVHRCGATLISNSW 234

  Fly   147 VLTAAHCVAQAATSNLQITAVRLGEWDTS-----TNPDCQYHEDSKVADCAPPYQDIAIEELLPH 206
            ::|||||..::|...         :|..|     :.|..|           ...:.|.|.|...:
  Rat   235 LITAAHCFVRSANPK---------DWKVSFGFLLSKPQAQ-----------RAVKSIVIHENYSY 279

  Fly   207 PLYNRTDRTQINDIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGW-----QASSSQ 266
            |.:|       ||||:|||:||....:.::..|||....:.....|:|  |.||     ...|..
  Rat   280 PAHN-------NDIAVVRLSSPVLYENNIRRACLPEATQKFPPNSDVV--VTGWGTLKSDGDSPN 335

  Fly   267 RMRKGYVTISSIEECQ--RKYASQQLRIQASKLC-GLTNSQ--ECYGNAGGPLMLFKNDG-YLLG 325
            .::||.|.|...:.|.  :.|...   |....|| |....:  .|.|::||||:...:.| :.|.
  Rat   336 ILQKGRVKIIDNKTCNSGKAYGGV---ITPGMLCAGFLEGRVDACQGDSGGPLVSEDSKGIWFLA 397

  Fly   326 GLVSFGPVPCPNPDWPDVYTRVASYIDWI 354
            |:||:|. .|..|:.|.|||||..|.|||
  Rat   398 GIVSWGD-ECALPNKPGVYTRVTHYRDWI 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 79/260 (30%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 80/268 (30%)
Blue background indicates that the domain is not in the aligned region.

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