DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and scaf

DIOPT Version :9

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster


Alignment Length:264 Identity:65/264 - (24%)
Similarity:103/264 - (39%) Gaps:67/264 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 DTDTRIREFPWLALIEYTRGNQEKIHACGGVLISDRYVLTAAHCVAQAATSNLQITAVRL--GEW 172
            |.|....|.||.|:|   .....|...|||.:|.|::||::|.||     :.|.:|.:|:  |||
  Fly   426 DLDANFAEIPWQAMI---LRESSKTLICGGAIIGDQFVLSSASCV-----NGLPVTDIRVKAGEW 482

  Fly   173 DT-STNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQ 236
            :. |||...             |:|...::.:..||.|:.:  |..:|:|::||....:....:|
  Fly   483 ELGSTNEPL-------------PFQLTGVKTVDVHPDYDPS--TNSHDLAIIRLERRLEFASHIQ 532

  Fly   237 PICLPNKQLRADELEDLVTEVAGWQASSSQRMRKGYVTISSIEECQRKY-------ASQQLRIQA 294
            |||:.::..:  :.|...|  :||          |...:|..||....:       |..:....:
  Fly   533 PICISDEDPK--DSEQCFT--SGW----------GKQALSIHEEGALMHVTDTLPQARSECSADS 583

  Fly   295 SKLCGLTNSQECYGNAGGPLMLFKNDGYLLGGLVSFGPVPC--------PNPDWPDVYTRVASYI 351
            |.:|..|....|..:.|..|.........|.|:.: |...|        ..||           |
  Fly   584 SSVCSATKFDSCQFDVGSALACGSGSSVRLKGIFA-GENSCGEGQTVRFAKPD-----------I 636

  Fly   352 DWIH 355
            .||:
  Fly   637 KWIN 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 30..82 CDD:288855
Tryp_SPc 111..356 CDD:238113 64/263 (24%)
Tryp_SPc 111..354 CDD:214473 62/260 (24%)
scafNP_610180.1 FtsK <198..>334 CDD:332908
Tryp_SPc 428..616 CDD:238113 56/224 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435492
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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