DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and Jon25Bii

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_608882.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster


Alignment Length:238 Identity:66/238 - (27%)
Similarity:94/238 - (39%) Gaps:56/238 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 CGGVLISDRYVLTAAHCVAQAATSNLQITAV-RLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAI 200
            |||.:|...:|:|||||...|.:..:...|: ||....|.|.....:.:                
  Fly    71 CGGSIIGHTWVITAAHCTHGAHSVTIYYGALWRLQAQYTHTVGSGHFRQ---------------- 119

  Fly   201 EELLPHPLYNRTDRTQINDIALVRLASPAKLNDF---VQPICLPNKQLRADELEDLVTEVAGWQA 262
                 |..||..:..  |||:|:.....    ||   :..:.||:...|.|..       |||.|
  Fly   120 -----HSDYNTNNLN--NDISLINTPHV----DFWHLINKVELPDGNERHDSF-------AGWWA 166

  Fly   263 SSSQRMR-------KGYVT-----ISSIEECQRKYASQQLRIQASKLCGLT--NSQECYGNAGGP 313
            .:|...|       ..|:.     |.:.:||...|.:..  |..:.:|..|  ....|.|::|||
  Fly   167 LASGWGRPCDSCGVSDYLNCVDSQIITRDECSSVYGTDV--ITDNVICTSTPGGKSTCAGDSGGP 229

  Fly   314 LMLFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHD 356
            |:|  :|...|.|:.||..........||.:|||.||:|||.|
  Fly   230 LVL--HDRSKLVGVTSFVAASGCTSGLPDGFTRVTSYLDWIRD 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 65/236 (28%)
Jon25BiiNP_608882.1 Tryp_SPc 42..268 CDD:214473 63/234 (27%)
Blue background indicates that the domain is not in the aligned region.

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