DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and Hpn

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:312 Identity:86/312 - (27%)
Similarity:128/312 - (41%) Gaps:71/312 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VQVC-CPSTAGLGALTHPLLPSDCGKVRW---QRSNDTDTRIREFPWLALIEYTRGNQEKIHACG 138
            :.|| ||....|.|..     .|||:.:.   :.....|:.:..:||...:.|     :..|.||
  Rat   176 ISVCDCPRGRFLTATC-----QDCGRRKLP
VDRIVGGQDSSLGRWPWQVSLRY-----DGTHLCG 230

  Fly   139 GVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAIEEL 203
            |.|:|..:|||||||..:....        |..|....         ..||..:|....:.::.:
  Rat   231 GSLLSGDWVLTAAHCFPERNRV--------LSRWRVFA---------GAVARTSPHAVQLGVQAV 278

  Fly   204 LPH----PLYNRTDRTQINDIALVRLASPAKLNDFVQPICLP--NKQLRADELEDLVTEVAGW-- 260
            :.|    |..:.|.....||||||.|:|...|.:::||:|||  .:.|    ::..|..|.||  
  Rat   279 IYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQAL----VDGKVCTVTGWGN 339

  Fly   261 ------QASSSQRMRKGYVTISSIEECQRK--YASQQLRIQASKLC------GLTNSQECYGNAG 311
                  ||...|..|   |.|.|.|.|...  |.:|   |:....|      |:   ..|.|::|
  Rat   340 TQFYGQQAVVLQEAR---VPIISNEVCNSPDFYGNQ---IKPKMFCAGYPEGGI---DACQGDSG 395

  Fly   312 GPLM----LFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHDSLK 359
            ||.:    :.....:.|.|:||:| ..|.....|.|||:|..:.:||..::|
  Rat   396 GPFVCEDRISGTSRWRLCGIVSWG-TGCALARKPGVYTKVIDFREWIFQAIK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 2/4 (50%)
Tryp_SPc 111..356 CDD:238113 76/270 (28%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736 9/28 (32%)
Tryp_SPc 204..441 CDD:238113 74/272 (27%)

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