DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3505 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:322 Identity:82/322 - (25%)
Similarity:139/322 - (43%) Gaps:67/322 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LLSGNLSQSDRNLLRDNQCGVRGNDVQVCCPSTAGLGAL-THPLLPSDCG-KVRWQR----SNDT 111
            :|:..|..|...|.||           :..|....:.|. ...:|.|:|| .:.:.|    ::..
  Rat   137 ILNKKLQSSQ
SFLKRD-----------ISLPYLREMNAAQAEHILNSNCGLGMEYPRIARIADGK 190

  Fly   112 DTRIREFPWLALIEYTRGNQEKIHACGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTST 176
            ......:||.:.::.     |.||.||..||..::::|:|||...  ..|.::..|..|.  |..
  Rat   191 PAGSNSWPWQSSLQV-----EGIHLCGASLIGSQWLVTSAHCFDN--YKNPKLWTVSFGR--TLG 246

  Fly   177 NPDCQYHEDSKVADCAPPYQDIAIEELLPHPLY--NRTDRTQINDIALVRLASPAKLNDFVQPIC 239
            |                |.....:|.::.|..|  ::.|    :|||:|:|:||...::.::.:|
  Rat   247 N----------------PLTTRKVESIIIHENYAAHKHD----DDIAVVKLSSPVLFSENLRTVC 291

  Fly   240 LPNKQLRADELEDLVTEVAGWQASSS-----QRMRKGYVTISSIEECQR--KYASQQLRIQASKL 297
            ||....:.  |......|.||.|..:     ..:::..:.|.|.:.|.:  .|..   .|.:..:
  Rat   292 LPEATFQV--LPKSKVFVTGWGALKANGPFPNSLQEVEIEIISNDVCNQVNVYGG---AISSGMI 351

  Fly   298 CG--LTNSQE-CYGNAGGPLMLF--KNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWI 354
            |.  ||...: |.|::||||::.  :|..||| |:||:| :.|...:.|.:||||..|.:||
  Rat   352 CAGFLTGKLDACEGDSGGPLVISDNRNKWYLL-GIVSWG-IDCGKENKPGIYTRVTHYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 6/28 (21%)
Tryp_SPc 111..356 CDD:238113 69/258 (27%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188 2/8 (25%)
Tryp_SPc 185..411 CDD:214473 67/261 (26%)

Return to query results.
Submit another query.