DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and CG18420

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:315 Identity:85/315 - (26%)
Similarity:120/315 - (38%) Gaps:106/315 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DNQCGVRGNDVQVCCPSTAGLGALTHPLLPSDCGKVRWQRSNDTDTRIREFPWLALIEYTRGNQE 132
            |::||.|         |...||    |.:.:  |||..:.|:         ||:|.: :|..|| 
  Fly    28 DSECGTR---------SPLKLG----PRIVN--GKVAVRNSS---------PWMAFL-HTSSNQ- 66

  Fly   133 KIHACGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQD 197
              ..|||.|||.|.|||||||.....|     ..|||||::....   .|.|:.:|         
  Fly    67 --FICGGTLISRRLVLTAAHCFIPNTT-----IVVRLGEYNRKLK---GYREEHQV--------- 112

  Fly   198 IAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGWQA 262
               .....|..|:  ..|..|||||:||.|.......::|||:.                  |.|
  Fly   113 ---NRTFQHRFYD--PNTHANDIALLRLVSNVVYKANIRPICIM------------------WDA 154

  Fly   263 SSSQRMRKGYVTISSIE--------ECQRKYASQQLRI-----QASKLC------------GLTN 302
            |....       |.||:        ..:..:.|.:||.     |.||:|            |..|
  Fly   155 SWKHH-------IDSIKVLTGTGWGRTESMHDSSELRTLDISRQPSKMCAFGSVLSNQFCAGNWN 212

  Fly   303 SQECYGNAGGP---LMLFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWI 354
            |..|.|:.|||   ::.::|....:...::.....|..   |.|:|.|.|:|::|
  Fly   213 SNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNKRCQR---PSVFTDVMSHIEFI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 4/13 (31%)
Tryp_SPc 111..356 CDD:238113 73/272 (27%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 76/286 (27%)

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