DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3505 and Tmprss5

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:366 Identity:92/366 - (25%)
Similarity:143/366 - (39%) Gaps:97/366 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FPALLVVVGSLALGANAQLPPINCVAKIPSGRVTGHCISIRECDYFMRILLSGNLSQSDRNLLRD 68
            |..|....|||.  ..|..|..||    ||||:..                           |:.
  Rat   165 FAQLSARPGSLV--EEAWQPSTNC----PSGRIVS---------------------------LKC 196

  Fly    69 NQCGVRGNDVQVCCPSTAGLGALTHPLLPSDCGKVRWQRSNDTDTRIREFPWLALIEYTRGNQEK 133
            ::||.|....::........|              ||             ||.|.:  ..|::  
  Rat   197 SECGARPLASRIVGGQAVASG--------------RW-------------PWQASV--MLGSR-- 230

  Fly   134 IHACGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDI 198
             |.||..:::..:|:|||||:.....|       ||..|        :.|...........:|..
  Rat   231 -HTCGASVLAPYWVVTAAHCMYSFRLS-------RLSSW--------RVHAGLVSHSAVRQHQGT 279

  Fly   199 AIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGW--- 260
            .:|:::|||||:..:...  |:||::|.:|...:|.|..:|||.|:....:...  ..|:||   
  Rat   280 MVEKIIPHPLYSAQNHDY--DVALLQLRTPINFSDTVSAVCLPAKEQHFPQGSQ--CWVSGWGHT 340

  Fly   261 ---QASSSQRMRKGYVTISSIE----ECQRKYASQQLRIQASKLCGLTNSQECYGNAGGPLMLFK 318
               ...||..::...|.:.|.:    .|....|.....:.|..|.|  .:..|.|::||||:...
  Rat   341 DPSHTHSSDTLQDTMVPLLSTDLCNSSCMYSGALTHRMLCAGYLDG--RADACQGDSGGPLVCPS 403

  Fly   319 NDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHDSLK 359
            .|.:.|.|:||:|. .|..|:.|.||.:||.::|||||:::
  Rat   404 GDTWHLVGVVSWGR-GCAEPNRPGVYAKVAEFLDWIHDTVQ 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440 8/49 (16%)
Tryp_SPc 111..356 CDD:238113 70/254 (28%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747 16/70 (23%)
Tryp_SPc 208..441 CDD:238113 74/286 (26%)

Return to query results.
Submit another query.