DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and CG30288

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster


Alignment Length:284 Identity:84/284 - (29%)
Similarity:127/284 - (44%) Gaps:53/284 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LLPSDCGKV-----RWQRSNDTDTRIREFPWLALIEYTRGNQEKIHACGGVLISDRYVLTAAHCV 154
            ||.:|||..     |.:.....|..:...||:..:..: |..    .|||.||:.|:||||.||:
  Fly    26 LLENDCGTTSSNGYRARIDGGRDAGMESNPWMVRVMIS-GKA----VCGGSLITARFVLTAEHCI 85

  Fly   155 AQAATSNLQITAVRLGEWDTSTNP--DCQYHEDSKVADCAPPYQDIAIEELLPH--PLYNRTDRT 215
            :....:      |||||:|| .:|  ||    |..|  |.|...::.::..:.|  |.|      
  Fly    86 SPMYMN------VRLGEYDT-RHPIFDC----DDFV--CTPRAYNVDVDRKIVHSNPGY------ 131

  Fly   216 QINDIALVRLASPAKLNDFVQPICL-PNKQLRADELEDLVTEVAGWQASS--SQRMRKGYVTISS 277
               ||.|:|:......:::|:|||| ..|.|..:.|..|.....||..:|  .::.|....|:..
  Fly   132 ---DIGLLRMQRSVIFSNYVRPICLILGKTLGGNPLSILRFNFTGWGTNSDGEEQDRLQTATLQQ 193

  Fly   278 IEE--CQRKYASQQLRIQASKLC-GLTNSQECYGNAGGPL---MLFKNDGYLLG-GLVSFGPVPC 335
            :.:  |:|  ..:.|.|  |.:| |...|..|.|::||||   ..|:..|.:.. |:.|.|...|
  Fly   194 LPQWSCER--PGRPLDI--SYICAGSYISDSCKGDSGGPLSAIRTFEGQGRVFQFGVASQGLRLC 254

  Fly   336 PNPDWPDVYTRVASYIDWIHDSLK 359
            ..   ..:||.|..:.|||.|.::
  Fly   255 SG---LGIYTNVTHFTDWILDVIQ 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 77/258 (30%)
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 75/258 (29%)
Blue background indicates that the domain is not in the aligned region.

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