DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and CG30088

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:278 Identity:93/278 - (33%)
Similarity:138/278 - (49%) Gaps:52/278 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LLPSDCGKVRWQRSNDT------DTRIREFPWLALIEYTRGNQEKIHACGGVLISDRYVLTAAHC 153
            |:|| || |.::.:..|      :..::..|::|.:.|:    .:|| |||.:||.||:||||||
  Fly    29 LIPS-CG-VSYESNVATRIVRGKEAMLKSAPFMAYLYYS----SEIH-CGGTIISSRYILTAAHC 86

  Fly   154 VAQAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQIN 218
            :.       ....|||||.|.:.|||||      ...|:||.::.   :::....|.|.||...|
  Fly    87 MR-------PYLKVRLGEHDITRNPDCQ------GGSCSPPAEEF---DIVLATKYKRFDRFLAN 135

  Fly   219 DIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGW-QASSSQRMRKGYVTISSIEECQ 282
            ||||::|:...:.|..:|||||......|..:.:.  :..|| |..::........|:.:     
  Fly   136 DIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEF--QAFGWGQTETNHSANVLQTTVLT----- 193

  Fly   283 RKYASQQLR------IQASKLC-GLTNSQECYGNAGGPLMLFKN-DG---YLLGGLVSFGPVPCP 336
             :|.::..|      |..::|| |...|..|.|::||||:...| ||   ||..|:||||...|.
  Fly   194 -RYDNRHCRSVLSMPITINQLCVGFQGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQ 257

  Fly   337 NPDWPDVYTRVASYIDWI 354
            :   |.|||.|.:||.||
  Fly   258 S---PGVYTYVPNYIRWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 87/262 (33%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 86/260 (33%)
Blue background indicates that the domain is not in the aligned region.

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