DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and CG43742

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster


Alignment Length:233 Identity:65/233 - (27%)
Similarity:98/233 - (42%) Gaps:52/233 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 CGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTN-PDCQY--HEDSKVADCAPPYQDI 198
            |||.||..:|||||||||     .:|....|.|||.:.|.. |.|::  ..::||          
  Fly    58 CGGSLIHKQYVLTAAHCV-----RDLDEVTVHLGENNRSCPIPVCKHVLRLNAKV---------- 107

  Fly   199 AIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTE------- 256
                 :.||  |......:|||||:||.........::|||:        .|::.||.       
  Fly   108 -----ILHP--NFHGNIFLNDIALLRLEREVIFEAHIRPICI--------ILDEDVTSNNQNNFT 157

  Fly   257 VAGWQASSSQRMRKGYVTISSIEECQRKYASQQLRIQASKLC-GLTNSQECYGNAGGPLM-LFKN 319
            ..||..:....: ...::...:....:....|.:    :.:| |.|:...|..::||||: .|.:
  Fly   158 AYGWGKTEHGNI-SDVLSFIDLVRLPKSMCYQNI----NTICAGSTSGDTCESDSGGPLIGNFVH 217

  Fly   320 DGY---LLGGLVSFGPVPCPNPDWPDVYTRVASYIDWI 354
            .|.   :|.|:.|:|...|..  ...|||.|.:|..||
  Fly   218 RGKSRDILFGITSYGDAECSG--LFGVYTDVNAYKSWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 65/233 (28%)
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 63/231 (27%)
Tryp_SPc 273..467 CDD:473915
Blue background indicates that the domain is not in the aligned region.

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