DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3505 and CG42694

DIOPT Version :10

Sequence 1:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001188994.1 Gene:CG42694 / 10178792 FlyBaseID:FBgn0261584 Length:512 Species:Drosophila melanogaster


Alignment Length:280 Identity:68/280 - (24%)
Similarity:103/280 - (36%) Gaps:91/280 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SNDTDTRIREFP---WLALIEYTRGNQEKIHA-CGGVLISDRYVLTAAHCV-------AQAATSN 161
            ||.:.|::|: |   |||.|  :.|.    |. |.|.|||.::||:||.|:       .|...||
  Fly    32 SNQSITKLRQ-PQAGWLAHI--SNGT----HVLCSGSLISKQFVLSAAQCIDVHGKLFVQLGVSN 89

  Fly   162 LQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLA 226
                |.:...|.|.:|.....|...::.                            .||.|::|:
  Fly    90 ----ATKSPHWYTVSNVVIPSHSGKRLQ----------------------------RDIGLLKLS 122

  Fly   227 SPAKLNDFVQPICLPNKQLRADELEDLVTEVAGWQASSSQRMRKGYVTI----SSIEECQRKYAS 287
            .....||||.|||:   .|..:.| |:|..:..:..|:.....|...||    .|.:.|:...:.
  Fly   123 QSVDYNDFVYPICI---ALNTNTL-DMVKILQNFTTSAWLSKNKNPQTIVLSQLSRDRCKLNLSG 183

  Fly   288 QQLRIQASKLC--GLTNSQECYGNAGGPL-------------MLFKNDGYLLGGLVSFGPVPCPN 337
               .:...::|  .|..:..|:.::|..|             |||...||:.|            
  Fly   184 ---NVTPKEICAASLQRNNSCFIDSGSALTQPIIQGSNIVREMLFGIRGYVNG------------ 233

  Fly   338 PDW---PDVYTRVASYIDWI 354
            ..|   |.:|..||..:.||
  Fly   234 RSWCSEPAIYIDVAECVGWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 66/277 (24%)
CG42694NP_001188994.1 Tryp_SPc 46..253 CDD:473915 61/263 (23%)
Tryp_SPc 319..502 CDD:473915
Blue background indicates that the domain is not in the aligned region.

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