DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)L1231 and ino80db

DIOPT Version :9

Sequence 1:NP_001247104.1 Gene:l(3)L1231 / 41776 FlyBaseID:FBgn0086686 Length:1200 Species:Drosophila melanogaster
Sequence 2:XP_009300512.1 Gene:ino80db / 563304 ZFINID:ZDB-GENE-070112-2072 Length:847 Species:Danio rerio


Alignment Length:835 Identity:176/835 - (21%)
Similarity:265/835 - (31%) Gaps:293/835 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 PLPPSKFHHTTLA-QHLQKVECLKKKKSLPLACQNNNNNSNLPNNNNVESLKKPVVQGTSYNQTH 344
            |:|  |.|..... .|||.:..|.||:..    :..:...:|..|..|.||......|.......
Zfish    65 PIP--KAHERKYCNSHLQVMGVLPKKERK----KKQDTIESLALNITVPSLALKTHNGLEILPPS 123

  Fly   345 PPPLMVFNTGTVAVPAQSPQTAAPQK--HSTGNSVDDSDLNEIPVNVIFRKPQEAGGAAKTGGPG 407
            |||.:|     ..:|:........:|  .|:|              ...:||||.          
Zfish   124 PPPALV-----CLLPSDPFAFYKEEKMFKSSG--------------AFLKKPQET---------- 159

  Fly   408 GLSAPVSGTPQTRPAEVKMVTPLTPPTPPEMSAPPLLAQMQPPQIPTSCVPALAPSFKVSSPAVL 472
                               :..........:.|..|.....|..:..||:|.|.......:|  :
Zfish   160 -------------------LNHKQKQQDHSVDANHLRTSSLPSTLSHSCLPPLLTGRATQTP--I 203

  Fly   473 SPKVISPAPASPKLLCPTAPASTNSLQ---------------------IAPKAVPATTTSSAPAL 516
            :|.  ||..|:|.:...:...:::|||                     ...|.||| .:..||..
Zfish   204 NPS--SPRAATPTVRSGSLFKTSSSLQDTHQGSKDSTDNKIKLDLNHAFDKKVVPA-ASGMAPCC 265

  Fly   517 ATKSEQMSSKVANLNAFNRQAPIASKGVRNGITNNNNNR----NSNVVAKKSSPTSMPPPKDPIA 577
            .....::..|..  .|..:|||...|..|  :.:.:..|    ||::........|         
Zfish   266 DDTQSRLIKKCT--VAMQQQAPCLKKLHR--LMDQHKGRFQDLNSHLACVPGLDWS--------- 317

  Fly   578 PIAANELTDSEHRQRRRKPAS-ACRRSLDTLSENESFSVD--SPYC--LQQHWLH-----SGFNN 632
                   .|||......|..| .|:|..:..||......:  :.:|  |:|..:|     .||  
Zfish   318 -------EDSEEEDGDWKLVSYQCQRLQEKRSEESRSRAERLAGFCSYLRQKHMHLCREQRGF-- 373

  Fly   633 KSHDAPLSQSNRREDRIAVRKGALRRQALQLLSTRSLQELPMRAAKQRLQCVQNMLIKYQ----- 692
                       |||.|   .:.|||:..:|     :.:|.|.:.|:         ||:.|     
Zfish   374 -----------RRERR---SQHALRKALVQ-----AAREEPHQTAQ---------LIQEQHQVTS 410

  Fly   693 -----------DHAGQQQGIGIGNHCLVASCKQPTLSMAAHCERHIVNNSTQQLFQPCVAWRMDG 746
                       |.:|..|.:..|.     :|:...|....||.:||:.|.:||||..|.|...||
Zfish   411 APSSTAVSLAGDDSGLCQAVVKGE-----NCRNSALPFTRHCFQHILQNRSQQLFSSCTARFADG 470

  Fly   747 TACQAPVFDVLHTLALCKVHS----------------HLRSGMDGARPASKQPPVSLPVAGVATL 795
            ..|..||||:.|...||..|:                |....:...||..|..|.:|        
Zfish   471 AQCSIPVFDITHQTPLCDEHAKKMDNFLRGDISRRTYHHHQQIQRHRPLKKAKPPAL-------- 527

  Fly   796 YVPVKQQRKRKANTNAVARPQK-------RG-----------------RKPAN---------EPI 827
                .::.|:|.......||||       :|                 |.|..         :.|
Zfish   528 ----SKKHKKKGKRGTQRRPQKPIPPALPQGNLALPSILCLPSQPSGIRSPLTPDLSADEFPDDI 588

  Fly   828 ANQISS-----QIN--------------------------KLIPGAGMQRKSSTTSLESIASNSQ 861
            .|.||.     ::|                          :|:| ...:.:.....|:::.|..:
Zfish   589 TNDISDIPHDLELNQEDFSDVLPRLPDDLQDFDLFEGKNSELLP-TSEEAEELVRVLQAMGSYPE 652

  Fly   862 SSATSHSQP---PYK-------PGNV---LAAVPAAQNLSQRSIPPALAPLSSD-FQPNHQQQEP 912
            |.|......   |.:       ||.|   |:|..:|:.||...:.|:|...|.| |.|:....:|
Zfish   653 SLACLSGMAELGPVEGVDCRSMPGGVVDLLSARLSAETLSSLELDPSLLHPSEDAFPPSPPSPQP 717

  Fly   913 LLVPKLEVDSLFKFDADQQQNQQQQSTLDPSLLS------LDIANI---KAEEIS 958
            .|.|...|..|    .|....|:|     |.||:      .|:||:   |.|::|
Zfish   718 PLTPPSSVGHL----TDSTYTQRQ-----PHLLAKMEDSKADLANLPLGKDEDVS 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)L1231NP_001247104.1 zf-C3Hc3H 712..767 CDD:290602 23/54 (43%)
ino80dbXP_009300512.1 zf-C3Hc3H 18..79 CDD:290602 4/15 (27%)
zf-C3Hc3H 432..491 CDD:290602 24/63 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579312
Domainoid 1 1.000 59 1.000 Domainoid score I10653
eggNOG 1 0.900 - - E1_2C29R
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26419
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16198
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.890

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