DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)L1231 and sumv-1

DIOPT Version :9

Sequence 1:NP_001247104.1 Gene:l(3)L1231 / 41776 FlyBaseID:FBgn0086686 Length:1200 Species:Drosophila melanogaster
Sequence 2:NP_498116.2 Gene:sumv-1 / 175720 WormBaseID:WBGene00016409 Length:1024 Species:Caenorhabditis elegans


Alignment Length:998 Identity:195/998 - (19%)
Similarity:310/998 - (31%) Gaps:354/998 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VTPPILFNAQKSRARLTDS---NRGSNKRQTAATAAANRKANLVAQLSVTEAAKAQASLASNNTT 138
            |.|...|:.:.|....|.|   ||.....:.|  :..:.|.::...|:.::..:......|...:
 Worm   295 VDPKCSFHIKSSAIAETTSCPCNRCVQPGEHA--SPKDEKNSITCYLNSSDDDEPTLGNLSRIES 357

  Fly   139 NFHHVTQSQRQSTALQLQLPLQSQSQSQASPKRATNVCIVRPQQQQLEKIATSESCQSPAAPPP- 202
            ....:.|...||..|...||    .:.|..|.:     ::||.|.               .||| 
 Worm   358 MVSPMQQFSNQSNTLTAPLP----RRYQGPPAQ-----VLRPPQM---------------GPPPG 398

  Fly   203 --LYAHTPSLWQTPLLIDNGQKQQLLQQQHQQPQQQQSVAIALVSPPTSPASLPSPTLPPATAAV 265
              ...:.|...:||.:    ..|||.:||..:.|:::.::                    .|.|.
 Worm   399 INQVPYQPKANRTPPM----TSQQLHEQQKLKMQEEEMMS--------------------QTCAS 439

  Fly   266 TAMVAPISVSPKGG----LPLPPSK------------FHHTTLAQHLQKVECLKKKKSLPLACQN 314
            ...|.||..|..||    ..|||.:            ||.             :.:|.:|.....
 Worm   440 DFRVRPIDASQFGGGKKKQRLPPRRSPSFGTSPNSYQFHQ-------------QSQKKMPSIIST 491

  Fly   315 NNNNSNLPNNNNVESLKKPVVQGTSYNQTHPPPLMVFNTGTVAVPAQSPQTAAPQK---HSTGNS 376
            ..|:|  |...|.:..|.   |.|| :.|.|.|...|       |..:.::..|:.   ..|.:|
 Worm   492 AYNSS--PGKMNFQGWKN---QSTS-SATRPLPQPRF-------PVHAARSQQPKMIPLEQTQDS 543

  Fly   377 VDDSDLNEIPVNVIFRKPQEAGGAAKTGGPGGLSAPVSGTPQTR---PAEVKMVTPLTPPTPPEM 438
            ::| |:...|   :|:.|:          |.....|.......|   |:.....:||||.|    
 Worm   544 IED-DIGPSP---MFQGPE----------PSRRGVPYYKNAYRRTELPSRHAQHSPLTPST---- 590

  Fly   439 SAPPLLAQMQPPQIPTSCVPALAPSFKVSSPAVLSPKVISPAPASPKLLCPTAPASTNSLQIAP- 502
                          .||....|||           ||  ||.|.:..   .|..:..:.|.||| 
 Worm   591 --------------STSSSQLLAP-----------PK--SPQPGTSS---QTFRSQASRLPIAPH 625

  Fly   503 KAVPATTTSSAPALATKSEQMSSKVANLNAFNRQAPIASKGVRNGITNNNNNRNSNVVAKKSSPT 567
            :|:.|...   ||          .|....|:..|    ..|.|.|:|.:         |::.||.
 Worm   626 RAIAAGLN---PA----------DVGTRPAYRSQ----MAGQRPGMTPS---------AQQGSPQ 664

  Fly   568 SMPPPKD-PIAPIAANELTDSEHRQRRRKPASACR--------RSLDTLSENESFSVDSP--YCL 621
            .:.||:. .:.|:|.|:   |....||:.|....|        .|...:....|.||..|  ..:
 Worm   665 LISPPRQGSMMPVAMNQ---SPQAVRRQTPVPPYRLMGPQRVTTSYTVVRSGSSSSVAGPSRSSV 726

  Fly   622 QQHWLHSGFNNKSHDAPLSQSNRREDRIAVRKGALRRQALQLLSTRSLQELPMRAAKQRLQCVQN 686
            .....|:..:...||..|:..|.|                                         
 Worm   727 ASGSQHTALDTVQHDPRLANINVR----------------------------------------- 750

  Fly   687 MLIKYQDHAGQQQGIGIGNHCLVASCKQPTLSMAAHCERHIVNNSTQQLFQPCVAWRMDGTACQA 751
                        ..:.|||..| ::..|..:.:.      :..||.::                 
 Worm   751 ------------TFLSIGNRDL-STLTQDEIDLL------MAGNSPEK----------------- 779

  Fly   752 PVFDVLHTLALCKVHSHLRSGMDGARPASKQPPVSLPVAGVATLYVPVKQQRKRKANTNAVARPQ 816
                           ...::|..||:.:||       .||.|        |:...|.:.:|..|.
 Worm   780 ---------------GGRKAGAPGAKESSK-------AAGGA--------QKGTSAASTSVPEPT 814

  Fly   817 KRGR--------------KPANE------PIANQISSQINKLIPGAGMQRKSSTTSLESIASNSQ 861
            |...              .||.|      |.|..|:|...|:......:..||..:|....::|.
 Worm   815 KSSESSVDPQSDVSFSNPSPAPEVIEKVAPAAMTITSNKRKIDETLASESTSSEATLIHDTTSSS 879

  Fly   862 SSATSHSQPP-YKPGNVLAAVPAAQ-------------NLSQRSIP------PALAPLSSDFQPN 906
            |:.|...:|| .|..:|.|.||:.:             :.::|:.|      |..|.::::...:
 Worm   880 SAETVSGEPPAKKSSDVSAPVPSPEKEKEKIDRPKTPKSSTKRTTPTPSGRTPRAAAIAANQAIS 944

  Fly   907 HQQQEPLLVPKLEVDSLFKFDADQQQNQQQQSTLDPSLLSLDIANIKAEEISQIVAQLAAAGGDL 971
            |.:..   ||.....|       ...:..|::.|| .|..|.:| ..|||..|.:...:..||..
 Worm   945 HSKPN---VPSASTSS-------SAASTDQENPLD-LLAELSVA-AAAEEQQQAIGSTSKNGGST 997

  Fly   972 QNPNNN--NNNNIGIHNNNSVHF 992
            :.....  :.::||....||..:
 Worm   998 KKTQRKSPSRSSIGKKRENSEEY 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)L1231NP_001247104.1 zf-C3Hc3H 712..767 CDD:290602 3/54 (6%)
sumv-1NP_498116.2 zf-C3Hc3H 253..302 CDD:290602 2/6 (33%)
YqfQ 779..921 CDD:290884 34/188 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158714
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16198
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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