DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)L1231 and ino80da

DIOPT Version :10

Sequence 1:NP_650379.1 Gene:l(3)L1231 / 41776 FlyBaseID:FBgn0086686 Length:1200 Species:Drosophila melanogaster
Sequence 2:NP_001410255.1 Gene:ino80da / 110440037 ZFINID:ZDB-GENE-091204-416 Length:922 Species:Danio rerio


Alignment Length:755 Identity:174/755 - (23%)
Similarity:256/755 - (33%) Gaps:224/755 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 PLPPSKFHHTTLAQHLQKVECLKKKKSLPLACQNNNNNSNLPNNNNVESLK-KPVVQGTSYNQTH 344
            |:|.:: .......|||.:..:.||:             .....:.:|.:: :..|:..:.|.|.
Zfish    65 PIPKAE-ERRYCNSHLQVLGFIPKKE-------------RKKKQDGLEEVRSRAHVESVALNITV 115

  Fly   345 PPPLMVFNTGTVAVPAQSPQTAAPQKHSTGNSVD-------DSDLNEIPVNVIFRKPQEAGGAAK 402
            |...:....|..|.|..|..|..|...|  :.:|       |||:.|   :::.|..|.:....|
Zfish   116 PSLALRDTNGLPASPPCSRLTPMPLLDS--DLLDPFAFYEEDSDVEE---SLLQRPAQRSSSKRK 175

  Fly   403 TGGPGGLSAPVSGTPQT-RPAE-----VKMVT-----PLTPPTPPEMSAPPLLAQMQPPQIPTSC 456
            ..     |.||.|...| |..|     ...||     |.:||.||.....|.....:|...|...
Zfish   176 AS-----STPVIGLRVTARDLEPDIEHFSAVTESCTLPSSPPPPPPSPPQPSQHTERPTYAPLGT 235

  Fly   457 VPAL----APSFKVSS----PAVLSPKVISPAPASPKLL----CPTAPASTNSLQIAPKAVPATT 509
            |..|    ||....||    ||.|..:.:...||||:.|    ||    ...|:.:.|.|..|  
Zfish   236 VQTLLCKPAPPESASSVPLPPAGLQNQPVIWRPASPRPLSAHDCP----QPRSVALRPAAFTA-- 294

  Fly   510 TSSAPALATKSEQMSSKVANLNAFNRQAPIASKGVRNGITNNNNNRNSNVVAKKSSPTSMPPPKD 574
               .|....:.:.:....|     |||..........|:..:.::.:..             ..:
Zfish   295 ---PPVCLLRLQHLVQLYA-----NRQREHGDLFPHLGLDWSEDSADDE-------------DTE 338

  Fly   575 PIAPIAANELTDSEHRQRRRKPASACRRSLDTLSENESFSVDSP---------YC--LQQHWLHS 628
            .:.|     |.....|.:.|.|             ::|.|.|.|         .|  ||:.:.|.
Zfish   339 ELVP-----LLPQAWRLQERSP-------------HQSSSSDKPLSRRARLAQLCSYLQERYKHL 385

  Fly   629 GFNNKSHDAPLSQSNRREDRIAVRKGALR---------RQALQLLSTRSLQELPMRAAKQRLQCV 684
                ...|...|:.:|.  |.|.||..|.         .|.:|.||..|......|:|...    
Zfish   386 ----CRRDRAASRHSRY--RYAFRKALLHAASKDPDCTAQLIQKLSRSSQTSSCSRSAAPH---- 440

  Fly   685 QNMLIKYQDHA--GQQQGIGIGNHCLVASCKQPTLSMAAHCERHIVNNSTQQLFQPCVAWRMDGT 747
                 ||:..|  |..:|         .||....|..:.||.:||:.|.:||||..|.|...||.
Zfish   441 -----KYERTACTGSTKG---------QSCSNTALPFSRHCFQHILLNRSQQLFSSCTARFADGQ 491

  Fly   748 ACQAPVFDVLHTLALC-----KVHSHLRSGMDGARPASKQPPVSLPVAGVATLYVPVKQQRKRK- 806
            .|..||||:.|...||     |:.:.||.  ||.|.:.:|                 :|:|.|| 
Zfish   492 QCSVPVFDITHQTPLCDEHAKKMDNFLRG--DGHRRSQQQ-----------------QQRRPRKK 537

  Fly   807 ----ANTNAVARPQKRGRKPANEPIANQISSQINKLIPGAGMQRKSSTTSLESIASNSQSSATSH 867
                |.|....:.::||.:...:||...: .|.|.|:|                   |.|..|.|
Zfish   538 TKPPALTKKHKKKRRRGPRRPQKPIPPAV-PQGNLLMP-------------------SLSLPTHH 582

  Fly   868 SQPPYKPGNVLAAVPAAQNLSQRSIPPALA----PLSSDFQPNHQQQEPLLVPKLEVDSLFKFDA 928
            :.         ...|:...||...:|..:|    .:.:|.:.|.:....:| |:|. |.|..||.
Zfish   583 AH---------VRSPSTPELSADELPDDIANEMPDIPNDLELNQEDFSDVL-PRLP-DDLQDFDL 636

  Fly   929 DQQQNQQQQSTLDPSLLSLDIANIKAEEISQIVAQLAAAG 968
            .:.:|.:...|              .||..::|..|.|.|
Zfish   637 FEGKNGELLPT--------------TEEAEELVRALQAMG 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)L1231NP_650379.1 PHA03247 <245..578 CDD:223021 70/327 (21%)
zf-C3Hc3H 712..767 CDD:464023 24/59 (41%)
ino80daNP_001410255.1 zf-C3Hc3H 18..79 CDD:464023 2/14 (14%)
zf-C3Hc3H 453..511 CDD:464023 25/66 (38%)

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