DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)L1231 and ino80d

DIOPT Version :10

Sequence 1:NP_650379.1 Gene:l(3)L1231 / 41776 FlyBaseID:FBgn0086686 Length:1200 Species:Drosophila melanogaster
Sequence 2:XP_002936433.3 Gene:ino80d / 100493655 XenbaseID:XB-GENE-6041462 Length:1024 Species:Xenopus tropicalis


Alignment Length:1172 Identity:238/1172 - (20%)
Similarity:384/1172 - (32%) Gaps:369/1172 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 PLQSQSQSQASPKRATN--VCIVRPQQ------QQLEKIA--TSESCQSPAAPPPLYAHTPSLWQ 212
            ||.|.|......:|...  .||....:      :|.|.:|  .|:.|.:|........:..|..|
 Frog    16 PLCSYSPKLCKQRRLNGYAFCIRHVLEDKTAPFKQCEYVAKYNSQRCTNPIPKSEDRRYCNSHLQ 80

  Fly   213 TPLLI---DNGQKQQLLQQQHQQPQQQQSVAIALVSPPTS-PASLPSPTLPPATAAVTAMVAPIS 273
            ....|   :..:|...|:....: .|.:::|.:|..||.. |..|....|.|             
 Frog    81 VLGFIPKKERKKKNDALEDVKAR-HQMETMAFSLTVPPLKMPNGLDGMNLSP------------- 131

  Fly   274 VSPKGGLPL--------PPSKFHHTTLAQHLQKVECLKKKKSLPLACQNNNNNSNLPNNNNVESL 330
              |...||:        .|..|...  .|.|:|...:|||....||             .|.:.|
 Frog   132 --PGARLPINYLETDLEDPFSFEEE--KQELKKGTSVKKKLQSKLA-------------QNRQRL 179

  Fly   331 KKPVVQGTSYNQTHPPPLMVFNTGTVAVPAQSP--QTAAPQKHSTGNSVDDSDLNE---IPVNVI 390
            ::..:  .:.:|.|..|          .||.||  ..:..::|:....:  |.|::   ||.|::
 Frog   180 RETEI--VNVHQEHFSP----------HPAPSPLHSPSLQEQHALVQPI--STLSKPTGIPQNLV 230

  Fly   391 FRKPQEAGGAAKTGGPGGLSAPVSGTPQTRPAEVKMVTPLTPPTPPEMSAPPLLAQMQPPQIPTS 455
            .:.||          |...|.||.|        |..||.....|..:.|..|             
 Frog   231 CKSPQ----------PPNTSQPVQG--------VSPVTNTVAQTRHQSSKRP------------- 264

  Fly   456 CVPALAPSFKVSSPAVLSPKVISPAPASPKLLCPTAPASTNSLQIAPKAVPA-----TTTSSAPA 515
                    |.|..|....|:                   |:.:|:|..|:||     :.......
 Frog   265 --------FSVLPPVTELPR-------------------TDRIQLAATALPAYSYYVSRLQRLVK 302

  Fly   516 LATKSEQMSSKVANLNAFNRQAPIASKGVRNGITNNNNNRNSNVVAKKSSPTSMPPPKDPIAPIA 580
            |.|:.:|:.:                                                |......
 Frog   303 LCTRKQQLDT------------------------------------------------DLFPHFG 319

  Fly   581 ANELTDSEHRQRRRKPASACRRSLDTLSENESFSVD----------------SPYC--LQQHWLH 627
            .:...||...|......|..|.:   .|..|||..|                :..|  .||.:.|
 Frog   320 LDWSEDSGEEQEDSDQTSPYRTA---WSFRESFQYDCKKLDIEEAHGRSSRIAQLCTYFQQKYKH 381

  Fly   628 SGFNNKSHDAPLSQSNRRED---------RIAVRKGALRRQALQLLSTRSLQELPMRAAKQRLQC 683
                       |.:..|.|.         |.|:::.|||...   .:.:.||||      :|..|
 Frog   382 -----------LCRLERAESCQKKYRHTFRRALQQAALREPE---TTGQLLQEL------RRTTC 426

  Fly   684 VQNMLIKYQDHAGQQQ----GIGIGNHCLVASCKQPTLSMAAHCERHIVNNSTQQLFQPCVAWRM 744
            ::...|  |....:.:    ...|.|.    :||...|..:.:|.:||::||:||||..|.|...
 Frog   427 IRTRPI--QPELRETEVTLCSATISNR----TCKNRALPYSRNCFQHILSNSSQQLFSSCTAKFA 485

  Fly   745 DGTACQAPVFDVLHTLALCKVH-----SHLRSGMDGARPASKQPPVSLPVAGVATLYVPVKQQRK 804
            ||..|..||||::|...||:.|     :.||.  |.:|....|                  ||||
 Frog   486 DGQQCSVPVFDIIHQTPLCEEHAKKMDNFLRG--DNSRKVQHQ------------------QQRK 530

  Fly   805 RKANTNAVA------RPQKRGRKPANEPIANQISSQINKLIPGAGMQRKSSTTSLESIASNSQSS 863
            .:..|...|      :.::||.:...:||...: .|.|..:|        |:.||....|:.:|.
 Frog   531 PRKKTKPPALTKKNKKKRRRGPRRPQKPIPPAV-PQGNLCMP--------SSLSLPMEVSSLRSP 586

  Fly   864 ATSHSQPPYKPGNV---LAAVPAAQNLSQRSIPPALAPLSSDFQ--PNHQQQEPLLVPKLEVDSL 923
            :|........|.::   :..:|....|:|......|..|..|.|  ...:.:...|:|..|    
 Frog   587 STPDLSTEELPDDITSEITDIPHDLELNQEDFSDVLPRLPDDLQDFDFFEGKNGELLPTTE---- 647

  Fly   924 FKFDADQQQNQQQQSTLDPSLLSLDIA----NIKAEEISQ--IVAQLAAAGGD-LQNPNNNNNNN 981
               :|::.:...|..|....|.|:.:.    |...:::|.  |.|....:||. :|:.:..:..:
 Frog   648 ---EAEELERALQAVTSLECLSSIAVLTQADNAAGQDLSDRGIAAFSTGSGGSVIQSLSREDQTD 709

  Fly   982 IGIHNNNSVHFNNNNNNSM--NYSNNNNNSFPSFNTAFGNAMGQ---PSNTITHNGHAVPAVLAN 1041
            :|...|..:..||..:..:  |...:...|.||...: |:..||   |:|           |..:
 Frog   710 LGDLLNGRIGHNNFTSLELDENLLGSTTLSSPSAPLS-GHIQGQFSSPAN-----------VGLS 762

  Fly  1042 TADLLGQD----------MFGICENSSA---------YASSEDTGLGGLSESELIGTNDADDIAL 1087
            :|.|:.|.          ..|:.|.:||         ...::|     |..|:....:|....:.
 Frog   763 SATLISQSSLGERALPGTFHGLHEGNSAPQRTLQAEILIKADD-----LITSQQQYNSDHSHSSP 822

  Fly  1088 NGAHLLEEHDLVNVFDTL--------SDDAFNELFQS-----VQQAECEAMDRALDRALQQTMGG 1139
            .|:|...||......|.:        |.|:.:..|.|     .|......::..|...:.:|..|
 Frog   823 QGSHYDSEHVPSPYSDQITSPHATSYSADSLSAAFSSDVPIITQHLLTTQLNMPLSGVVNRTHWG 887

  Fly  1140 S-----ADSAFLNDFLDVGDDLLADAVMHSPNTSGID-APPLFGDSSSGGGNSSSNGASDIRGLV 1198
            :     :|.:..:.|:.....||:.::...|.||..: ..|.|       ...:.|.::.:.||.
 Frog   888 NLPVNLSDPSGFSTFITSDGHLLSTSLSTPPATSHSETTQPTF-------STVTPNSSNMLPGLP 945

  Fly  1199 QT 1200
            ||
 Frog   946 QT 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)L1231NP_650379.1 PHA03247 <245..578 CDD:223021 61/351 (17%)
zf-C3Hc3H 712..767 CDD:464023 25/59 (42%)
ino80dXP_002936433.3 zf-C3Hc3H 18..79 CDD:464023 12/60 (20%)
zf-C3Hc3H 453..508 CDD:464023 24/54 (44%)

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