DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7886 and Lrrc45

DIOPT Version :9

Sequence 1:NP_650378.1 Gene:CG7886 / 41775 FlyBaseID:FBgn0038248 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_038942780.1 Gene:Lrrc45 / 688318 RGDID:1590053 Length:736 Species:Rattus norvegicus


Alignment Length:814 Identity:160/814 - (19%)
Similarity:300/814 - (36%) Gaps:200/814 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KGHSGEVARKPNTVVVSVPPLVKKSSKSRSFHFRYLELCRAKNLTPVPEIRSKSNATTT-FLELC 74
            :||:.||              :........|...|..||:.....|...:..:.:..:. .|:|.
  Rat    49 RGHACEV--------------LSAFGDMEEFRRSYNRLCKESGAEPQEAVLQQLHQLSRGGLDLT 99

  Fly    75 GDKLAVSDWQLLTEALHYDLVLQQLVVRLRRTYPQTNIDPIDTEKRARLFRQRPVIYTRFIFNSL 139
            ...|.|...:.|.:.||.:.:|::||:.          |.:.:|:.:.|               |
  Rat   100 TQSLTVDTCRALGKLLHKETLLKELVLS----------DCMLSEEGSTL---------------L 139

  Fly   140 VQAIANCVSSNKNLSVLKLEGLPLQDGYIETIAKALADNECLESVSFRKSNIG--DKGCEVVCNT 202
            :|.:.    :|.::.:|.|:|..|:....|.:.|.|..|:.::|::...:|:|  ::.....|..
  Rat   140 LQGLC----ANTSVQLLDLKGNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEEAFATFCGG 200

  Fly   203 AKYLNRIEVFDLSECGLTSKGAEHVADMLK----MQKITRFTEGWEKSLRYRSVDVNTIGGLRTV 263
            ......:...||....::.||||.:|..||    :|::         .||:.:            
  Rat   201 LAANGTLRQLDLRNNQISHKGAEELALALKGNATLQQL---------DLRWNN------------ 244

  Fly   264 LLADNPEIGDVGIRWITEVLKEDAWIKKIDMEGCGLTDIGANLILDCLELN-TAITEFNVRNNEG 327
                   ||.:|.|.:...|..:..:.|:|:.|..:.......:...::.| ..||.|  |.|:.
  Rat   245 -------IGLLGGRALVNCLPSNRTLWKLDLAGNNIPGDILRAVEQAMDHNQDRITAF--RENQT 300

  Fly   328 ISKFLQRSIHDRLGCLPEEKQEPEYDLSCVNGLQSLPKNKK----------VTVSQLLSHTKALE 382
            .:|.|.:.:..    |.|||.:...||     ::::.|.::          |.|.||   .:||.
  Rat   301 RTKILSKEVQH----LQEEKSKQFLDL-----METIDKQREEMARDSRASAVRVGQL---QEALN 353

  Fly   383 EQLSFERTLR--------------KKAEKLNEKLSHQLMRPDSNHMVQEKAMEGGSQTNISREYV 433
            |:.|....|:              :||:.|.|.|:.......|....|||..:...|....||..
  Rat   354 ERQSIINALKAKLQMTEAALALSEQKAQDLGELLAAAEQERQSLSQRQEKERKLEQQEAADRESK 418

  Fly   434 ARNDVMPEVIKNSQSYRQSHFNRLVNSAATSPEVTPRSEIVTLRKEQQLQRQQ--PPPMEVKHLS 496
            ...|:                     |||....:..||::..|.::.:.|::|  ....|:.:.|
  Rat   419 LLRDL---------------------SAANEKNLLLRSQVDELERKVKSQQEQLFLTRQELTNTS 462

  Fly   497 LEQQIRNLRDVQKKVDLDVEEEEEEEEEEQQAEESQSESEPQN-EEQQHYEQQMQVQRKHLQVRK 560
            .|.:||           .::.||..:.|:::|:::..:.|..: :|..|..:.::...:.:|.|.
  Rat   463 AELKIR-----------AIQAEEHLDMEKRRAKQNMEDLEKLHCKEVDHMTRHLEESERAMQERV 516

  Fly   561 VRSE-IKYVENNP---KEAAKKNRESKSDHEFANERDFKLNPSVQFE-----TDIGDNVMVNPGH 616
            .|.| ::.....|   :|.::......|:...|.|...|.....:.|     ..:.:.:.:....
  Rat   517 QRLEALRLSLEEPSAMQELSRMKAAVLSERSQAEEELIKAKNQARLEEQHRLAHLEEKIRLLAQA 581

  Fly   617 RYEGGGGDTAYVYNYEHEQQQQPVKRGYEHGYVVGVGDGSHRRQRQSQLVEALVQKRVPGASDGH 681
            |.|..|  |..       ||:|.|.:             |..|..|..|.....|:|:.     .
  Rat   582 RDEAQG--TCM-------QQKQMVAQ-------------SQARASQLNLQMEGQQRRLE-----E 619

  Fly   682 VAQFVSNLERQANAGKTGKKRLKPRPEDDLQVPVGDMHMESSYMSRSEELSSTDVTLEN--SDYE 744
            :.|.:||.: |....:..:.|:      :||..:|.|..:   :...|.|......||.  ....
  Rat   620 LQQELSNKD-QEKVAEVARVRV------ELQEQMGRMQAD---LVAQEVLREKVAALERQLKVVG 674

  Fly   745 TEATDSTLLSSSKYSSMHVFVRRKQSESMSLTEE 778
            :|..::.|...|:.:|:...:|.|::|...:.:|
  Rat   675 SEHREALLDRESENASLREKLRLKEAEISRIRDE 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7886NP_650378.1 LRR_RI <142..320 CDD:238064 36/184 (20%)
leucine-rich repeat 153..180 CDD:275381 8/26 (31%)
leucine-rich repeat 181..208 CDD:275381 4/28 (14%)
leucine-rich repeat 209..246 CDD:275381 10/40 (25%)
leucine-rich repeat 260..285 CDD:275381 5/24 (21%)
Lrrc45XP_038942780.1 leucine-rich repeat 177..203 CDD:275380 4/25 (16%)
leucine-rich repeat 207..234 CDD:275380 9/26 (35%)
leucine-rich repeat 235..262 CDD:275380 8/54 (15%)
SMC_prok_B <330..674 CDD:274008 80/415 (19%)
LRR_RI <96..290 CDD:423007 49/250 (20%)
leucine-rich repeat 96..120 CDD:275380 7/23 (30%)
leucine-rich repeat 121..148 CDD:275380 9/55 (16%)
leucine-rich repeat 149..176 CDD:275380 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.