DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7886 and lrrc71

DIOPT Version :9

Sequence 1:NP_650378.1 Gene:CG7886 / 41775 FlyBaseID:FBgn0038248 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001038339.1 Gene:lrrc71 / 558774 ZFINID:ZDB-GENE-060503-892 Length:481 Species:Danio rerio


Alignment Length:454 Identity:84/454 - (18%)
Similarity:156/454 - (34%) Gaps:140/454 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ARKPNTV-----VVSVPPLVKKSSK---SRSFHFRYLELCRAKNLTPVPEIRSK----------- 63
            |.||:.|     .:...|..|.:..   |......:.|||:...:..:|.::.|           
Zfish     5 AEKPSKVDKVDSAIEEEPKPKTADDYQCSGHLQLEFPELCKLMGVKEIPSVKVKRPRILESRMTK 69

  Fly    64 -SNATTTFLELCGD------KLAVSDWQLLTEALHYDLVLQQLVVRLRRTYPQTNIDPIDTEKRA 121
             |......:||..:      ::.:|.|.:       |.::.|::.::        :..:......
Zfish    70 WSPGRCLQIELENEEHNNVKEVKISGWTV-------DELMLQVLSKI--------LPSLSNLLCL 119

  Fly   122 RLFRQRPVIYTRFIFNSLVQAIANCVSSNKNLSVLKLEGLPLQDGYIETIAKALADNECLESVSF 186
            |::|   :..|...|.|:...::.|    .||..:.|||.||.:   ::....|.::..|..:|.
Zfish   120 RMWR---IGLTDGTFTSMKNTVSLC----SNLRKVVLEGNPLPE---QSYHLLLGEDSMLTELSL 174

  Fly   187 RKSNIGDKGCEVV----CNTAKYLNRIEVFDLSECGLTSKGAEHVADMLKMQKITRFTEGWEKSL 247
            |.:.||::|..::    .|.......:...:|:...:...||.|:|..|::          .:||
Zfish   175 RNNRIGEEGARLIGSALSNPHSANKNLRSLNLAYNRIGDAGALHIAQGLRL----------NRSL 229

  Fly   248 RYRSVDVNTIGGLRTVLLADNPEIGDVGIRWITEVL-------KEDAWIKKIDMEGCGLTDIGAN 305
            ...|:..|              .|||.|...:.|||       :|....:|:.::|.....:.::
Zfish   230 LSLSLSYN--------------HIGDNGAARLAEVLGPFALTHEEIVERRKLLIKGDQSNMVQSS 280

  Fly   306 LILDCLELNTAITEFNVRNNEGISKFLQRSIHDRLGCLPEEKQEPEYDLSCVNGLQSLPKNKKVT 370
            |:                           |:.|        ..||...:...:.|..:.|:.|.|
Zfish   281 LV---------------------------SLAD--------SHEPALSVPSNSSLDQISKSAKHT 310

  Fly   371 VSQLLSHTKALEEQLSFERTLRKKAEKLNE----KLSHQLMR------PDSNHMVQEKAMEGGS 424
                   ||..:.....|:..:..|.|..|    |..::..|      .|.|.:|.|:  ||.|
Zfish   311 -------TKKRDNPKKEEKPAQSPAAKKEEAKVAKKDNKAPRSQAGKGKDKNLLVSEQ--EGTS 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7886NP_650378.1 LRR_RI <142..320 CDD:238064 37/188 (20%)
leucine-rich repeat 153..180 CDD:275381 7/26 (27%)
leucine-rich repeat 181..208 CDD:275381 7/30 (23%)
leucine-rich repeat 209..246 CDD:275381 6/36 (17%)
leucine-rich repeat 260..285 CDD:275381 7/31 (23%)
lrrc71NP_001038339.1 LRR_RI 71..>251 CDD:238064 43/228 (19%)
leucine-rich repeat 116..136 CDD:275380 5/22 (23%)
leucine-rich repeat 144..168 CDD:275380 7/26 (27%)
leucine-rich repeat 169..200 CDD:275380 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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