DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7886 and Lrrc31

DIOPT Version :9

Sequence 1:NP_650378.1 Gene:CG7886 / 41775 FlyBaseID:FBgn0038248 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_006232300.2 Gene:Lrrc31 / 310256 RGDID:1561499 Length:487 Species:Rattus norvegicus


Alignment Length:534 Identity:107/534 - (20%)
Similarity:182/534 - (34%) Gaps:169/534 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SDWQLLTEALHYDLVLQQLVVRLRRTYPQTNID-------PIDTEKRARL------FRQRPVIYT 132
            |||               ..:|..|....|.:|       .:||::.|.|      ..:..|.:.
  Rat    10 SDW---------------FQMRRSRRAADTCLDLNSYGLTAVDTKEAASLLPLLSDLEELDVSWN 59

  Fly   133 RFIFNSLVQAIANCVSSNKNLSVLKLEGLPLQDGYIETIAKALADNECLESVSFR-KSNIGDKGC 196
            .|:..:| .:..........|.||:|....|....::|:..||.....||.:|.. .|.:|.|..
  Rat    60 DFVSGTL-HSFTQQTHPVSKLKVLRLSSCRLTTEDVQTLGGALELIPDLEELSLSWNSQVGGKLP 123

  Fly   197 EVVCNTAKYLNRIEVFDLSECGLTSKGAEHVADML-KMQKITRF--------------------- 239
            :|: :|.:..::|...:|.:|.||.:..|.|..:| |:|.:..|                     
  Rat   124 QVL-HTFQQGSKIRTLELVDCALTPQDGEFVGHLLPKLQSLEVFDLSNNRNIGSSLDIIAQGLKS 187

  Fly   240 TEGWE-----------KSLRYRSVDVNTIGGLRTVLLADNPEIGDVGIRWITEVLKEDAWIKK-- 291
            |.|.:           ||:|........:..||.:.|:.|.|:|    |...||....|.:|.  
  Rat   188 TPGLKILKLHSCGLSPKSVRILDGAFAFLDALRILDLSCNKELG----RGFEEVPARLALLKHLE 248

  Fly   292 -IDMEGCGLTDIGANLILDCLELNTAITEFNVRNNEGISKFLQRSIHDRLGCLPEEK-------- 347
             :|:..|.||......:...:.|.:.:.|.::.:|..:...|: |:..||..||..|        
  Rat   249 VLDLHQCSLTAEDVTSLTQIVPLLSNLEELDLSSNRALGGSLE-SLLSRLRFLPSLKSLLINSCA 312

  Fly   348 -QEPEY----------------DLS---CVNGLQSLPKNKKVTVSQLLSHTKALEEQLSFERTLR 392
             |...:                |||   ||.|                 :.:.|::.|:..|:||
  Rat   313 LQRESFTALAEASVYLPALEILDLSWNKCVGG-----------------NLELLQQTLNLSRSLR 360

  Fly   393 KKAEKLNEKLSHQLMRPDSNHMVQEK------AMEGGSQTNISREYVARND-------------- 437
            :             :|..|..:|.|.      .|:.|....:.:..::.||              
  Rat   361 E-------------LRLSSCSLVTEDVALLALVMQTGHLATLQKLDLSYNDGICDAGWAIFCQNL 412

  Fly   438 -VMPEVIKNSQSYRQSH-------FNRLVNSAATSPEVTPRSEIVTLRKEQQLQRQQPPPMEVKH 494
             .:.|:.:...|.|.|.       |..|:.:....|.:|          ..:::|...|.::.|.
  Rat   413 CRLKELTELDISLRPSSSQECGQWFRHLLCAVTQLPVIT----------GIEMRRWVIPALQEKE 467

  Fly   495 LSLEQQIRNLRDVQ 508
            |....|.|. ||::
  Rat   468 LDCFTQDRR-RDIR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7886NP_650378.1 LRR_RI <142..320 CDD:238064 48/214 (22%)
leucine-rich repeat 153..180 CDD:275381 8/26 (31%)
leucine-rich repeat 181..208 CDD:275381 8/27 (30%)
leucine-rich repeat 209..246 CDD:275381 13/69 (19%)
leucine-rich repeat 260..285 CDD:275381 9/24 (38%)
Lrrc31XP_006232300.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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