DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7886 and Nod1

DIOPT Version :9

Sequence 1:NP_650378.1 Gene:CG7886 / 41775 FlyBaseID:FBgn0038248 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001164478.1 Gene:Nod1 / 107607 MGIID:1341839 Length:953 Species:Mus musculus


Alignment Length:473 Identity:98/473 - (20%)
Similarity:162/473 - (34%) Gaps:148/473 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SSKSRSFHFRYLELCRAKNLTPVPEIRSKSNATTTFLELCGDKLAVSDWQLLTEALHYDLVLQQL 99
            ||...|..|.:..|.....|.|.| .|:|.:...|.|.|||         ||.:|  ...:|:||
Mouse   555 SSSCHSSFFSFQCLGGRSRLGPDP-FRNKDHFQFTNLFLCG---------LLAKA--RQKLLRQL 607

  Fly   100 VVRLRRTYPQTNIDPIDTEKRARLFRQRPVIYTRFIFNSL---------VQA------------- 142
            |                  .:|.|.|:|..::.. :|.||         ||:             
Mouse   608 V------------------PKAILRRKRKALWAH-LFASLRSYLKSLPRVQSGGFNQVHAMPTFL 653

  Fly   143 -IANCVSSNKNLSVLKLEGLPLQDGYIETIAKALADNECLESVSF-------------RKSNIGD 193
             :..|:...::..|.:|....:...|::.........:| .::||             ..:|:.|
Mouse   654 WMLRCIYETQSQKVGRLAARGISADYLKLAFCNACSADC-SALSFVLHHFHRQLALDLDNNNLND 717

  Fly   194 KGCEVV--CNTAKYLNRIEVFDLSECGLTSKGAEHVADMLKMQKITRFTEGWEKSLRYRSVDVNT 256
            .|.:.:  |     .:|:.|..||...:|..|.:.:.:.|...||..|.                
Mouse   718 YGVQELQPC-----FSRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFL---------------- 761

  Fly   257 IGGLRTVLLADNPEIGDVGIRWITEVLKEDAWIKKIDMEGCGLTDIGANLILDCLELNTAITEFN 321
              ||.      |.:|.|:|.|::.::|.|...:|.:.:....:|..|...:...::.:|:|.:..
Mouse   762 --GLY------NNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVG 818

  Fly   322 VRNN----EGISKFLQRSIHDRLGCLPEEKQEPEY-DLS-CVNGL---------QSLPKNKKVTV 371
            :..|    ||...|.:..           |..|.. .|| ..||:         |:|.:|..:||
Mouse   819 MWGNQIGDEGAKAFAEAL-----------KDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTV 872

  Fly   372 SQLLSH------TKALEEQLSFERTLRKK---AEKLNEKLSHQLMRP-DSNHMVQEKAMEGGSQT 426
            ..|..:      .:...|.|...:|||..   ..::..|.:.||.|. ..|..:.|..:.|    
Mouse   873 IWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNG---- 933

  Fly   427 NISREYVARNDVMPEVIK 444
                     |.:.||..|
Mouse   934 ---------NLIKPEEAK 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7886NP_650378.1 LRR_RI <142..320 CDD:238064 35/206 (17%)
leucine-rich repeat 153..180 CDD:275381 3/26 (12%)
leucine-rich repeat 181..208 CDD:275381 6/41 (15%)
leucine-rich repeat 209..246 CDD:275381 9/36 (25%)
leucine-rich repeat 260..285 CDD:275381 7/24 (29%)
Nod1NP_001164478.1 DD 21..104 CDD:301326
AAA 194..>291 CDD:214640
NACHT 197..367 CDD:283404
LRR 1 702..725 3/22 (14%)
LRR 2 727..750 6/22 (27%)
LRR_RI <728..941 CDD:238064 55/260 (21%)
leucine-rich repeat 730..757 CDD:275380 6/26 (23%)
LRR 3 755..778 10/46 (22%)
leucine-rich repeat 758..785 CDD:275380 10/50 (20%)
LRR 4 783..806 3/22 (14%)
leucine-rich repeat 786..813 CDD:275380 3/26 (12%)
leucine-rich repeat 814..841 CDD:275380 6/37 (16%)
LRR 5 839..862 5/22 (23%)
leucine-rich repeat 842..869 CDD:275380 7/26 (27%)
LRR 6 867..890 4/22 (18%)
leucine-rich repeat 870..897 CDD:275380 5/26 (19%)
LRR 7 895..918 6/22 (27%)
leucine-rich repeat 898..925 CDD:275380 7/26 (27%)
LRR 8 923..946 7/33 (21%)
leucine-rich repeat 926..946 CDD:275380 6/30 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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