DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7886 and cep78

DIOPT Version :9

Sequence 1:NP_650378.1 Gene:CG7886 / 41775 FlyBaseID:FBgn0038248 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_031751460.1 Gene:cep78 / 100037836 XenbaseID:XB-GENE-5884411 Length:763 Species:Xenopus tropicalis


Alignment Length:522 Identity:135/522 - (25%)
Similarity:238/522 - (45%) Gaps:62/522 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 HFRYLELCRAKNLTPVPEIRSKSNATTTFLELCGDKLAVSDWQLLTEALHYDLVLQQLVVRLRRT 106
            |:.|  ||..::..|:|.:  |:|.....|....|::.:|||..:..:|..:..|..:.:   ::
 Frog    18 HYEY--LCALQDSVPIPAV--KANIRHGSLSFNADRIKLSDWLPILNSLKINKSLLNVSI---KS 75

  Fly   107 YPQTNIDPIDTEKRARLFRQR-PVIYTRFIFNSLVQAIANCVSSNKNLSVLKLEGLPLQDGYIET 170
            ..|..:.....||....|::| |.|.::.:...:.:||.:|:|.:.:|..|:|.||||::..:..
 Frog    76 CHQPGLGEFGAEKYGIYFKRRIPPIRSKDMTFQVCKAITSCLSVSGSLKELELHGLPLRERDLRI 140

  Fly   171 IAKALADNECLESVSFRKSNIGDKGCEVVCNTAKYLNRIEVFDLSECGLTSKGAEHVADMLKMQK 235
            :||.||.:..:||:|....:.||:|.|::|.:.|....|:..:.:.|.||.:||||:|.::|.|.
 Frog   141 LAKGLAASSSVESLSLAYCSCGDEGLEIICQSVKNSPTIKTVNFTGCNLTWRGAEHIASIIKHQA 205

  Fly   236 ITRFTEGWEKSLRYRSVDVNTIGGLRTVLLADNPEIGDVGIRWITEVLKEDAWIKKIDMEGCGLT 300
            ..|.:|.|.:|||||..|::.:.|||.|.|..|..:||.|...:.||:.||.|:|.:|:..||::
 Frog   206 TRRHSEAWAESLRYRRPDLDCMAGLRRVTLNSNTLVGDRGAIALAEVIGEDLWLKALDLRQCGIS 270

  Fly   301 DIGANLILDCLELNTAITEFNVRNNEGISKFLQRSIHDRLGCLPEEKQEPEYDLSCVNGLQSLPK 365
            :.||...|:..:.||.:...::|.|..|.:.|.::|.:|:               .:|...:..:
 Frog   271 NEGAQAFLNAFQTNTTLIILDIRRNPLIDRSLLKTIIERV---------------LMNAHDTNSE 320

  Fly   366 NKKVTVSQLLSHTKALEEQLSFERTLRKKAEKL--------------NEKLSHQLMRPD------ 410
            .|..|......:.|..::..|......:|.:.:              .:..|.:|..||      
 Frog   321 YKWYTSPSSKDNGKVRQKWRSINNWNGRKGKNIVRVGFSTKKPMVIGRKYSSKELYCPDPRPPGA 385

  Fly   411 SNHMVQEKAMEGGSQTNISREYVA--RNDVMPEVIKNSQSYRQSHFNRLVNSAATSPEVTPRSEI 473
            ...:....|.......::|.|:.:  :.|...:||.:|::..:|..:..:.|........|.|..
 Frog   386 EGFLPWRTAERAKRHRDVSGEWASPGKADTAVKVIMDSETSSESEKSDNILSILDQEYAVPGSGE 450

  Fly   474 VTLRKEQQLQRQQPPPMEVKHLSLEQQI--RNLRDVQK---KVDLDVEEEEEEEEEEQQAEESQS 533
            .|..|            ..|.|.:|.||  :||.|.:|   :.|..:.|.|.|....:|...:.|
 Frog   451 KTSVK------------NYKCLQVELQICQKNLNDERKARLRADERIMELEFENTRLRQINHTLS 503

  Fly   534 ES 535
            ||
 Frog   504 ES 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7886NP_650378.1 LRR_RI <142..320 CDD:238064 67/177 (38%)
leucine-rich repeat 153..180 CDD:275381 11/26 (42%)
leucine-rich repeat 181..208 CDD:275381 9/26 (35%)
leucine-rich repeat 209..246 CDD:275381 14/36 (39%)
leucine-rich repeat 260..285 CDD:275381 10/24 (42%)
cep78XP_031751460.1 LRR_RI <110..275 CDD:423007 63/164 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006566
OrthoInspector 1 1.000 - - otm49371
Panther 1 1.100 - - LDO PTHR24110
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4507
SonicParanoid 1 1.000 - - X5564
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.040

Return to query results.
Submit another query.