DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and Fat1

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_017455748.1 Gene:Fat1 / 83720 RGDID:621254 Length:4624 Species:Rattus norvegicus


Alignment Length:2053 Identity:504/2053 - (24%)
Similarity:806/2053 - (39%) Gaps:572/2053 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SMDYK------------KVRLKGQRRRSFSSYISSISIQVIILTTLISLVASNRPPRFAIDGQSE 68
            |||:|            :.|.:...|.|...:.|..|:::.:..:..|      |.:|..|..|.
  Rat  1952 SMDHKTGTIAIQNTTQLRSRYELTVRASDGRFTSVASVRINVKESRES------PLKFTQDAYSA 2010

  Fly    69 IVLRLKESPETKVGTL-IYTLKGYDPDNDPLTFGKRN-------SHDSEIIRIENTGGNEAKIFL 125
            :|   ||: .|:..|| :.|..| :|.|:||.:...|       ||.|.:  :..||        
  Rat  2011 VV---KEN-STEAKTLAVITAIG-NPINEPLFYRILNPDRRFKISHTSGV--LSTTG-------- 2060

  Fly   126 AKELDRELQDEYAIVLTLTDSHYSD---HNYVTQSFLLLVEDINDNVPTF--LPYQNAIEIPEGS 185
             ...|||.|:.:.:|:.:|......   |..|.    :.|||.|||.|.|  |||...::: :..
  Rat  2061 -IPFDREQQETFVVVVEVTKEREPSAVAHVVVK----VTVEDQNDNAPVFVNLPYYAVVKV-DAE 2119

  Fly   186 APGVVSTLEATDADEGAYGQVVYYLQE----------------------------------LDGD 216
            ...|:..:.|.|.|.|..|.|.|||:|                                  .||.
  Rat  2120 VGHVIRHVTAIDRDSGRNGDVHYYLKEHHDHFEIGPSGDISLKKQFEHDTLNKEYLVTVVAKDGG 2184

  Fly   217 NDVFS-----------------------------IATHQ-------------------------- 226
            |..||                             :.||.                          
  Rat  2185 NPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENVQTHSPVVHVQANSPEGLKVFYSITDGDPFS 2249

  Fly   227 ------GKGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAA---ILVKVKDLEDQPPEFV 282
                  ..|::.:...||:|....|:|.:.|.|..      ||..|   :.:.|:|:.|.||.||
  Rat  2250 QFTINFNTGVINVIAPLDFESHPAYKLSIRATDSL------TGAHAEVFVDIVVEDINDNPPVFV 2308

  Fly   283 EVQAVARIAEDAPVGTKVLRVRAIDGDRGINNPIAYSL-----EANDLFDINPHTGIVHTLTKLD 342
            :......::|.:.:|..:|:|||.|.|...|..|:|.|     :::|.|.|:.|||::..:..||
  Rat  2309 QQSYSTTLSEASVIGAPILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRALD 2373

  Fly   343 REEQSDQVNGAHILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQ 407
            .|:...     |.|.:.|.:     ..|.|.:....|||.|:|:||..|.|.:.||...::|:|.
  Rat  2374 YEQFQQ-----HKLLVRAVD-----GGMPPLSSDVVVTVDVTDLNDNPPLFEQQVYEARISEHAA 2428

  Fly   408 TNTPLNFI---------DEEVQNVVFDHDEGNNGTFRLFLDPPNDLFEIVPELAVNEANFMLRVK 463
            ..   :|:         ..::..:.:....||:          :..|.|..|..:      :.:.
  Rat  2429 HG---HFVMCVKACDADRSDLDRLEYSILSGND----------HKSFVIDGETGI------ITLS 2474

  Fly   464 NSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTI 528
            |.:....:.|..:|.::    .|...| |||.|.:.:...|.:.|.|.|..|...:.||:...|:
  Rat  2475 NPRRHTLKPFYSLNVSV----SDGVFR-SSARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTL 2534

  Fly   529 ITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLN--------LNPITGVITIKQAGGTAFDREIIS 585
            :..|:|.|.|||.||.:          ..||:|        :|....|.|:::     .|||..:
  Rat  2535 VVQVKATDRDSGIYGHL----------TYHLVNDFAKDRFYVNDGGQVFTLER-----LDREAPA 2584

  Fly   586 RHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQYETKLLENQAEFETPLQLEARDADL 650
            ...::|..:.....|......:.|.:.|.|||||.|...:||..:..:.|:..:.:::.|.||| 
  Rat  2585 EKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNVGSSAAKGTSVVKVFASDAD- 2648

  Fly   651 NGTENSQVTY------EIVEGLYRSNFTIDPQSGLLRPVHSF---------DFEELVDGSS---- 696
            .|: |:.|||      |.||    .|..|:..:||:....|.         .|...||..|    
  Rat  2649 EGS-NADVTYAIEADSESVE----ENLEINQLTGLITTKESLIGLENEFFTFFVRAVDNGSPPKE 2708

  Fly   697 -----------------RRSDPYTGGSFSI-------REIDLLVRARDSGIPMLSTV-------- 729
                             |.|:|:.  ::||       .||| |:|...||..:.:.|        
  Rat  2709 SVVPVYVKILPPEVQLPRFSEPFY--TYSISEDMPIGTEID-LIRVEHSGTVLYTLVKGNTPESN 2770

  Fly   730 ----------------------------------------------VPVLIYVQDVNDNAPIFQQ 748
                                                          :.|.|.|:|.|||:|:.:.
  Rat  2771 RDEFFVIDRQSGRLKLEKSLDHETTKWYQFSILARCTLDDYEVVASIDVSIQVKDANDNSPVLES 2835

  Fly   749 SFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGAG----DKFIINSETGVISVAHGA 809
            :.|...:.|:||.||.|:||.|.|.| |..|..|:|.:.....    :.|.||.|||.|:..   
  Rat  2836 NPYEAFIVENLPAGSRVIQVRASDLD-SGVNGQVMYSLDQSQDADIIESFAINMETGWITTL--- 2896

  Fly   810 NLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPP-VLKEMPALQILENTPV 873
               .:|...:|:.|.:.|:|.|.| ...||.:|..|::::.|||:.|| ...|:....:.|:.|.
  Rat  2897 ---KELDHEERASYQIKVVASDHG-EKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPP 2957

  Fly   874 GTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVDSIEGTLKVV--KLL 936
            |.::..:..||.|.:.|.|            :....:...  |.||.|.|::::...:|.  |.|
  Rat  2958 GGVIAILSTTDADSEEINR------------QVSYFITGG--DALGQFAVENMQNDWRVYVKKPL 3008

  Fly   937 DRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSITENSINGAMIVN 1001
            |||:.:...|.:|..|     |...::..:.::|||.|||:|......|..:|.|:::.|.:::.
  Rat  3009 DREQKDSYLLTVTATD-----GTFSSKARVEVKVLDANDNSPVCERTAYSDAIPEDALPGKLVMQ 3068

  Fly  1002 VLASDVD--KNRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPAR 1064
            |.|:|.|  .|..|||.|.|:...:  ..|:|.|||:...:.:|.|:....:..|:|||.|  .|
  Rat  3069 VSATDADIRSNAEITYTLFGSGAEK--FKLNPDTGELRTLALLDREEQAVYHLLVKATDGG--GR 3129

  Fly  1065 SSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDADSGDFGKITF-LMDRISS 1128
            |....:.:|:.|.|||.|.|.......|:.||..|||.:..:||.|||:|...||:: |:|  |:
  Rat  3130 SCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDADAGLNRKISYSLLD--SA 3192

  Fly  1129 QGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESR--NAFKQVFISILDENDN 1191
            .|:|:|:..:|:|.:...||||.:..|.|.::|.|.       |..|  .|...|.:|:||.|||
  Rat  3193 DGQFSINEQSGILQLEKHLDRELQAVYTLTLKAADQ-------GLPRKLTATGTVVVSVLDINDN 3250

  Fly  1192 PPEVDLPMSCVLITEYHELHERVAS--IVGKD------ADDPTTPNGRLDFAITRGNKDGMFELR 1248
            ||          :.||.|....|:.  ::|.:      |......|..:.:||..||:.|.|   
  Rat  3251 PP----------VFEYREYGATVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKF--- 3302

  Fly  1249 QIDAWNAQIFASKSL--RNRYGNYSLTITTRDMGLPANIVHNTLDICVSDFNDHAPVFVRPLHNT 1311
            .||:....||..::|  .:.:| |.||:...|.|.|:.....|::|.::|.||::|||.:..:.|
  Rat  3303 SIDSKTGAIFIIENLDYESSHG-YYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTT 3366

  Fly  1312 TVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKEQLNREKQ 1376
            .|  .|:|.:...::...|.|.|...|:.:.|.:.....||  .|.:|...||:.:.:.|:||..
  Rat  3367 VV--SEDAALEQPVITIMADDADGPSNSHILYSIIEGNQGS--PFTIDPVRGEIKVTKPLDRETI 3427

  Fly  1377 KIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERIKLPDTID 1441
            ..:.:.::|.|.|.|..::: ..:.|.|.:|||..|.|..:..||...|:...|...:||..| |
  Rat  3428 SGYTLTVQAADNGNPPRVNT-TTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVT-D 3490

  Fly  1442 KDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRATENCR-- 1504
            ||......|      ..:.||:||:...|.::....:||. ..:.|:|..::.|:|:..:|.:  
  Rat  3491 KDSSHNGPP------FSFAIVSGNDDNMFEVNQHGVLLTA-ATVKRKVKDHYLLHVKVADNGKPQ 3548

  Fly  1505 ------------NDSI-------------SGGEKRRRMGIEINNRLGGIVHNQQFGYDRFKHSRQ 1544
                        .:||             :.||:..          ||::             .:
  Rat  3549 LSSLTHIDIRVIEESIHPPAILPLEIFITASGEEYS----------GGVI-------------GK 3590

  Fly  1545 LRSTESNEYGPEDAELLSYEAYDSSQEDP----------TGGLATTHPELDSTVIKVKVRVLDIN 1599
            :.:|:.:.|     :.|:|..      ||          |||....|.:||.....:.|.|.|  
  Rat  3591 IHATDQDVY-----DTLTYSL------DPHMDGLFSVSSTGGKLIAHRKLDIGQYLLNVSVTD-- 3642

  Fly  1600 DNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGEIRQTLSEGLEN---VRK 1661
                        |..||.||..:                        .|:|...|.|.:   :|.
  Rat  3643 ------------GKFTTVADITV------------------------HIQQVTQEMLNHTIAIRF 3671

  Fly  1662 APFLLDQETGEVQLNFDPQKGMKGYFDFVVLANDTSGMKDVAHVFIYLLREDQKVRFVFRLQPDE 1726
            |....::..|:...||  |:.::....  :..||..                     :..|||.|
  Rat  3672 ANLTPEEFVGDYWRNF--QRALRNILG--IRKNDIQ---------------------IVSLQPSE 3711

  Fly  1727 LRSRVD-------------SFRDTLSNITESIVNIDEI 1751
            ..|.:|             |.:..|..|..|:.:|:||
  Rat  3712 PHSHLDVLLFVEKSGGTQISTKQLLHKINSSVTDIEEI 3749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 27/102 (26%)
Cadherin_repeat 179..276 CDD:206637 31/194 (16%)
Cadherin_repeat 287..388 CDD:206637 31/105 (30%)
Cadherin_repeat 397..506 CDD:206637 20/117 (17%)
Cadherin_repeat 514..617 CDD:206637 26/110 (24%)
Cadherin_repeat 625..742 CDD:206637 42/213 (20%)
Cadherin_repeat 751..853 CDD:206637 35/105 (33%)
Cadherin_repeat 865..976 CDD:206637 27/112 (24%)
Cadherin_repeat 985..1080 CDD:206637 31/96 (32%)
Cadherin_repeat 1090..1191 CDD:206637 38/103 (37%)
CA 1221..1302 CDD:214520 25/88 (28%)
Cadherin_repeat 1312..1409 CDD:206637 24/96 (25%)
Cadherin_repeat 1418..>1502 CDD:206637 22/83 (27%)
Cadherin_repeat 1617..1710 CDD:206637 14/95 (15%)
Fat1XP_017455748.1 Cadherin_repeat 39..145 CDD:206637
Cadherin_repeat 154..253 CDD:206637
Cadherin 278..357 CDD:421759
Cadherin_repeat 372..>444 CDD:206637
Cadherin_repeat 468..566 CDD:206637
Cadherin_repeat 576..663 CDD:206637
Cadherin_repeat 725..819 CDD:206637
Cadherin_repeat 827..924 CDD:206637
Cadherin_repeat 932..1016 CDD:206637
Cadherin_repeat 1043..1136 CDD:206637
Cadherin_repeat 1144..1242 CDD:206637
Cadherin_repeat 1251..1345 CDD:206637
Cadherin_repeat 1363..1476 CDD:206637
Cadherin_repeat 1485..1582 CDD:206637
Cadherin_repeat 1590..1686 CDD:206637
Cadherin_repeat 1695..1785 CDD:206637
Cadherin_repeat 1793..1898 CDD:206637
Cadherin_repeat 1919..1994 CDD:206637 9/41 (22%)
Cadherin_repeat 2008..2101 CDD:206637 31/112 (28%)
Cadherin_repeat 2109..2198 CDD:206637 18/89 (20%)
Cadherin_repeat 2211..2303 CDD:206637 15/97 (15%)
Cadherin_repeat 2311..2410 CDD:206637 32/108 (30%)
Cadherin_repeat 2418..2512 CDD:206637 20/117 (17%)
Cadherin_repeat 2520..2616 CDD:206637 26/110 (24%)
Cadherin_repeat 2625..2718 CDD:206637 24/98 (24%)
Cadherin_repeat 2732..2829 CDD:206637 15/99 (15%)
Cadherin_repeat 2837..2937 CDD:206637 36/107 (34%)
Cadherin_repeat 2946..3043 CDD:206637 27/115 (23%)
Cadherin_repeat 3056..3145 CDD:206637 30/92 (33%)
Cadherin_repeat 3153..3250 CDD:206637 38/105 (36%)
Cadherin_repeat 3258..3355 CDD:206637 27/100 (27%)
Cadherin_repeat 3363..3460 CDD:206637 26/101 (26%)
Cadherin_repeat 3469..3560 CDD:206637 23/98 (23%)
Cadherin_repeat 3585..3658 CDD:206637 23/134 (17%)
LamG 3878..4009 CDD:214598
EGF_CA 4040..4074 CDD:238011
EGF_CA 4077..4112 CDD:238011
EGF 4117..4147 CDD:394967
EGF_CA 4151..4187 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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