Protein Alignment Cad88C and Pcdh1

DIOPT Version :9

• Sequence 1: NP_731930.3
• Gene: Cad88C / 41774
• FlyBaseID: FBgn0038247
• Length: 1981
• Species: Drosophila melanogaster
• Sequence 2: XP_006526383.1
• Gene: Pcdh1 / 75599
• MGIID: 104692
• Length: 1238
• Species: Mus musculus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cad88C	NP_731930.3	Cadherin_repeat	76..168	CDD:206637
		Cadherin_repeat	179..276	CDD:206637
		Cadherin_repeat	287..388	CDD:206637
		Cadherin_repeat	397..506	CDD:206637
		Cadherin_repeat	514..617	CDD:206637
		Cadherin_repeat	625..742	CDD:206637
		Cadherin_repeat	751..853	CDD:206637
		Cadherin_repeat	865..976	CDD:206637
		Cadherin_repeat	985..1080	CDD:206637
		Cadherin_repeat	1090..1191	CDD:206637
		CA	1221..1302	CDD:214520
		Cadherin_repeat	1312..1409	CDD:206637
		Cadherin_repeat	1418..>1502	CDD:206637
		Cadherin_repeat	1617..1710	CDD:206637
Pcdh1	XP_006526383.1	Cadherin_2	59..138	CDD:369785
		Cadherin_repeat	172..276	CDD:206637
		Cadherin_repeat	284..383	CDD:206637
		Cadherin_repeat	402..502	CDD:206637
		Cadherin_repeat	512..608	CDD:206637
		Cadherin_repeat	617..711	CDD:206637
		Cadherin_repeat	730..812	CDD:206637
		Protocadherin	815..1029	CDD:369839

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000