| Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001365320.1 | Gene: | Cdhr4 / 69398 | MGIID: | 1916648 | Length: | 783 | Species: | Mus musculus |
| Alignment Length: | 687 | Identity: | 158/687 - (22%) |
|---|---|---|---|
| Similarity: | 251/687 - (36%) | Gaps: | 179/687 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 857 PVLKEMP-ALQILENTPVGTLVYRIQATDLDHKAILR--------YKLNPEHCEGRTEEGALVKS 912
Fly 913 SEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAAAK--GRQIAEGFLSIQVLDEND 975
Fly 976 N--------NPKFRLPFYRQSITENSINGAMIVNVLASDVDKNR-TITYALEGNPTYRSL----M 1027
Fly 1028 HLDPQTGEIVVASK-------IDHEQHQWLNFSVRA--TDSGIPARSSLVDVYITVLDENDNNPY 1083
Fly 1084 FVGGSKNYTISENAAPGTRVATLQAGDADSGDFGKITFLMDRISSQGK--FTIDADTGVLTVADR 1146
Fly 1147 LDR---ESKDSYNLVIEAWDNYQFGFLAGESRNAFKQVF---ISILDENDNPPEVDLPMSCVLIT 1205
Fly 1206 EYHELHERVASIVGKDAD-----DPTTPNGRLDFAITRGNKDGMFELRQIDAWNAQIFASKSLRN 1265
Fly 1266 RY---------------GNYSLTITTRDMGLPANIVHNTLDICVSDFNDHAPVFVRPLHNTTVRI 1315
Fly 1316 PENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKEQLNREKQKIHE 1380
Fly 1381 IRI----EAYDQGLPTSLSSDLDLTIYVRNVNDY----EPQFMVNEISVNFTE--HSDPGSERIK 1435
Fly 1436 LPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRL 1472 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | |
| Cadherin_repeat | 179..276 | CDD:206637 | |||
| Cadherin_repeat | 287..388 | CDD:206637 | |||
| Cadherin_repeat | 397..506 | CDD:206637 | |||
| Cadherin_repeat | 514..617 | CDD:206637 | |||
| Cadherin_repeat | 625..742 | CDD:206637 | |||
| Cadherin_repeat | 751..853 | CDD:206637 | |||
| Cadherin_repeat | 865..976 | CDD:206637 | 23/120 (19%) | ||
| Cadherin_repeat | 985..1080 | CDD:206637 | 25/108 (23%) | ||
| Cadherin_repeat | 1090..1191 | CDD:206637 | 25/108 (23%) | ||
| CA | 1221..1302 | CDD:214520 | 18/100 (18%) | ||
| Cadherin_repeat | 1312..1409 | CDD:206637 | 30/100 (30%) | ||
| Cadherin_repeat | 1418..>1502 | CDD:206637 | 16/57 (28%) | ||
| Cadherin_repeat | 1617..1710 | CDD:206637 | |||
| Cdhr4 | NP_001365320.1 | Cadherin_repeat | 236..326 | CDD:206637 | 24/106 (23%) |
| Cadherin_repeat | 338..434 | CDD:206637 | 22/114 (19%) | ||
| Cadherin_repeat | 441..540 | CDD:206637 | 31/103 (30%) | ||
| Cadherin_repeat | 555..644 | CDD:206637 | 15/51 (29%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24028 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||