Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_071407.4 | Gene: | CDH23 / 64072 | HGNCID: | 13733 | Length: | 3354 | Species: | Homo sapiens |
Alignment Length: | 1978 | Identity: | 580/1978 - (29%) |
---|---|---|---|
Similarity: | 915/1978 - (46%) | Gaps: | 278/1978 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 SSISIQVIILTTLISLVASNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPD---NDPL 98
Fly 99 TFGKRNSHDSEIIRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTD----SHYSDHNYVTQSFL 159
Fly 160 LLVEDINDNVPTF-LPYQNAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYYLQELDGDNDV-FS 221
Fly 222 IATHQGKGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEF----V 282
Fly 283 EVQAVARIAEDAP--VGTKVLRVRAIDGDRGINNPIAYSLEANDL---FDINPHTGIVHTLTKLD 342
Fly 343 REEQSDQVNGAHILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYR--CEVNEN 405
Fly 406 AQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLFL---DPPNDLFEIVPELAVNEANFMLRVKNSKS 467
Fly 468 LDFEQFTEVNFTIFAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHV 532
Fly 533 QAVDVDSGDYGTMGIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNA 597
Fly 598 GQ---GNRNTAQIIVDILDVNDNAPTFPQRQYETKLLENQAEFETPL-----QLEARDADLNGTE 654
Fly 655 NSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSFDFEELVDGSSRRSDPYTGGSFSIREIDLLVRAR 719
Fly 720 DSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVY 784
Fly 785 RIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISI 849
Fly 850 QDVN-NKPPVLKEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPE---HCEG---RTEEG 907
Fly 908 ALVKSSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAA---AKGRQIAEGFLSIQ 969
Fly 970 VLDENDNNPKFR---LPFYRQSITENSINGAMIVNVLASDVDK--NRTITYALEG--NPTYRSLM 1027
Fly 1028 HLDPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYT 1092
Fly 1093 ISENAAPGTRVATLQAGDADSGDFGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNL 1157
Fly 1158 VIEAWDNYQFGFLAGESRNAFKQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDA 1222
Fly 1223 DDPTTPNGRLDFAITRGNKDGM-FELRQIDAWNAQIFASKSLRNRYGNYSLTITTRDMGLPANIV 1286
Fly 1287 HNTLDICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYR-LKPDPL 1350
Fly 1351 GSYKMFEVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFM 1415
Fly 1416 --------VNEISVNFTEHSDPGSERIKLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRL 1472
Fly 1473 DPETHILTVDRELDREVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNRLGGIVHNQQFGYD 1537
Fly 1538 RFKHSRQLRSTESNEYGPEDAELLSYEAYDSSQEDPTGGLATTHPELDSTVIKVKVRVLDINDNP 1602
Fly 1603 PRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGEIR--QTLSEGLENVRKAPFL 1665
Fly 1666 LDQETG-----EVQLNFDPQKGMKGYFDFVVLANDTSGMKDVAHVFIYLLREDQKVRFVFRLQPD 1725
Fly 1726 ELRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVDKTKTDLYMHLVEREDNSIYEVSEVLKLI 1790
Fly 1791 DSHIESLNGLFKELNVLDTQAAEAQLLTAGPSRGPLFVWLIFTNLFLATLLVVTIALCASQRNGY 1855
Fly 1856 RRQLRAAKVNIFRGHSSMSLQDAQEPATRVPNTNKHSVQGSNPIWLKGYDNEWFKSEESGSIGGH 1920
Fly 1921 DSLDDNFLAVATQDMHETLKGTAKLFNN 1948 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 27/98 (28%) |
Cadherin_repeat | 179..276 | CDD:206637 | 27/98 (28%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 26/105 (25%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 30/113 (27%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 28/105 (27%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 32/121 (26%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 44/101 (44%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 32/119 (27%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 38/100 (38%) | ||
CA | 1221..1302 | CDD:214520 | 22/81 (27%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 25/97 (26%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 29/83 (35%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 27/99 (27%) | ||
CDH23 | NP_071407.4 | Cadherin_repeat | 42..128 | CDD:206637 | |
Cadherin_repeat | 136..231 | CDD:206637 | |||
Cadherin_repeat | 240..344 | CDD:206637 | |||
Cadherin_repeat | 352..456 | CDD:206637 | |||
Cadherin_repeat | 465..557 | CDD:206637 | |||
Cadherin_repeat | 566..667 | CDD:206637 | |||
Cadherin_repeat | 676..774 | CDD:206637 | |||
Cadherin_repeat | 782..886 | CDD:206637 | |||
Cadherin_repeat | 894..990 | CDD:206637 | |||
Cadherin_repeat | 999..1098 | CDD:206637 | |||
Cadherin_repeat | 1106..1203 | CDD:206637 | |||
Cadherin_repeat | 1218..1308 | CDD:206637 | |||
Cadherin_repeat | 1317..1414 | CDD:206637 | 2/19 (11%) | ||
Cadherin_repeat | 1426..1523 | CDD:206637 | 28/103 (27%) | ||
Cadherin_repeat | 1533..1630 | CDD:206637 | 27/101 (27%) | ||
Cadherin_repeat | 1638..1740 | CDD:206637 | 29/112 (26%) | ||
Cadherin_repeat | 1752..1847 | CDD:206637 | 29/108 (27%) | ||
Cadherin_repeat | 1855..1955 | CDD:206637 | 28/105 (27%) | ||
Cadherin_repeat | 1963..2065 | CDD:206637 | 32/121 (26%) | ||
Cadherin_repeat | 2075..2169 | CDD:206637 | 44/101 (44%) | ||
Cadherin_repeat | 2180..2289 | CDD:206637 | 32/120 (27%) | ||
Cadherin_repeat | 2301..2398 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 2406..2504 | CDD:206637 | 38/101 (38%) | ||
Cadherin_repeat | 2513..2607 | CDD:206637 | 23/101 (23%) | ||
Cadherin_repeat | 2620..2718 | CDD:206637 | 25/97 (26%) | ||
Cadherin_repeat | 2735..2841 | CDD:206637 | 40/180 (22%) | ||
Cadherin_repeat | 2850..2951 | CDD:206637 | 30/107 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 170 | 1.000 | Domainoid score | I3783 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D12697at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007436 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |