DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and fat3a

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_017206475.1 Gene:fat3a / 569256 ZFINID:ZDB-GENE-060929-1254 Length:4601 Species:Danio rerio


Alignment Length:2292 Identity:524/2292 - (22%)
Similarity:835/2292 - (36%) Gaps:700/2292 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ISLVASNR-PPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPD---NDPLTFGKRNSHDSEI 110
            |.|.:.|| .|:|.....::|.:|    .:.:|||.::.:|..|.|   |..|.....:.:....
Zfish   722 IDLFSVNRQTPQFDKSFPTDITVR----EDVEVGTSVFQVKALDGDTGFNGQLLHAIADGNTDSC 782

  Fly   111 IRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVEDINDNVPTFLP- 174
            ..|....| ...|||  .||||..|.|.:.:||.|......: ..:...:.:.|.|||.|.||. 
Zfish   783 FSIGILNG-VISIFL--PLDREKTDRYLLNITLYDLGQPQRS-TWRLLTVYIADANDNAPQFLQD 843

  Fly   175 --YQNAIEIPEGSAPGV-VSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQGKGILRLQKE 236
              |.  ..|.|.:..|. |..:||||.|:|..|::.|.|..   ....|.|  :...||:.:..:
Zfish   844 GGYH--ARISENTPIGTEVIQVEATDKDQGLNGEIQYSLLT---STSQFGI--NSSSGIVYVAGQ 901

  Fly   237 LDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAEDAPVGTKVL 301
            ||.|...|:.|:|.|.|||.:.........:.:.::|:.|.||.|:...|.||..||.||||.:.
Zfish   902 LDRELVPLFILKVEARDRAERAAQRFSITTLKITLEDVNDCPPAFIPSVANARALEDLPVGTVIA 966

  Fly   302 RVRAIDGDRGINNPIAYSLEANDL---FDINPHTGIVHTLTKLDREEQ---------SDQVNGAH 354
            .:...|.|.|:...:.|.|: ||.   |:::..:|.:....:||.|.|         .|:.....
Zfish   967 WLDTQDPDLGLGGQVRYLLD-NDYDGRFEVDKTSGAIRLTKELDYETQQFFNLTVRAKDKGRPVS 1030

  Fly   355 ILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEI--PTFGETVYRCEVNENAQTNTPLNFIDE 417
            :|.:|..||.                  |.|||:.:  |.|........|.|:.:..|.:     
Zfish  1031 LLSVSFVELE------------------VVDVNENLYAPYFSSFAMNGSVKESVRIGTSV----- 1072

  Fly   418 EVQNVVFDHDEGNNGTFRLFLDPPNDL--FEIVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTI 480
             :|....|.|.|.:|..:..:...:.|  |.|..|..|        :..:..||.|.......|:
Zfish  1073 -LQVSARDDDTGRDGEVQYSIRDGSGLGRFTIDEETGV--------IYTTDLLDRETQDSYWLTV 1128

  Fly   481 FAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGD-YGT 544
            :|.::....:.::..|.|.:.|.|||.|..|:.:|:|::||||.:|..:..:||.|.|:.. ...
Zfish  1129 YATDLGVVPQSAALQVYIQVEDVNDNSPLTSEPMYHATILENSPKDQSVIQIQAQDPDATTAEPR 1193

  Fly   545 MGIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQIIV 609
            :..|.::  |...:..::||.||:||   ......|||..:.|.|.|...|........|..:::
Zfish  1194 LSFRISS--GNPQNFFSINPRTGLIT---TTSRKLDREQQAEHVLEVTVSDGGSSPRHTTVWVVI 1253

  Fly   610 DILDVNDNAPTFPQRQYETKLLE-NQAEFETPL-QLEARDADLNGTENSQVTYEIVEGLYRSNFT 672
            .:||||||.||||::.|:.:|.| ::.:...|: ::.|.|.|...  |::::|.|::|.....|.
Zfish  1254 QVLDVNDNKPTFPEKMYQVRLPERSRKQRGAPIYRVFAYDQDQGA--NAELSYSIIDGNEDGKFI 1316

  Fly   673 IDPQSGLL---------------------------------------RP---------------- 682
            ||.::|::                                       ||                
Zfish  1317 IDAKTGVVSSPKKQFSAGTYDILTVKAVDNGRPQRWATARLHIEWIRRPPPNPIPLAFDEPLYNF 1381

  Fly   683 ----------------------------------------------------------------- 682
                                                                             
Zfish  1382 TIMETDRVADIVGVVSAQQQGSASLWFDITGPRSFREMFYILQTACGRNCSTEGGDVDSMFDVEK 1446

  Fly   683 -----------------------------------VH---------------------------- 684
                                               ||                            
Zfish  1447 GVGTIVIAKPLDAEQRSFYNLTLEVTDGTNVANTQVHITVLDNNDNPPVFSQPTYDITITEDTPP 1511

  Fly   685 ------------------SFDFEELVDGSSR---RSDPYTGGSFSIREID--------LLVRARD 720
                              :|..:..||.||.   |.||.:|..::.|.:|        |.:..:|
Zfish  1512 DTEVVQVLASDRDERHRLTFSLQSSVDPSSMRLFRIDPNSGVIYTARRLDHESRTQHILTIMVKD 1576

  Fly   721 SGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYR 785
            ...|...::..|||.|:||||:||:|....|...|.|....||:||.|||:|:| ...|..:.|.
Zfish  1577 QEFPYRRSLARVLIGVEDVNDHAPLFTMVMYDGQVYESAALGSAVLTVTALDKD-KGQNAQISYS 1640

  Fly   786 IQTG-AGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISI 849
            |.:| .|:.|.|:...|:||:|.      :|..|....|.|||.|.|.  |:..|.:|..|.|::
Zfish  1641 IDSGNTGNTFRIDPVLGIISLAR------ELDLSSIGHYVLSVKATDN--GSPALSSTAVVRIAV 1697

  Fly   850 QDVNNKPPVL--KEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEG-RTEEGALVK 911
            ...||..|..  .|..| :|.|:..:||.|..:.|..|   :.|.|.:  .|..| ||       
Zfish  1698 TLSNNAGPKFPQNEYQA-EISESVAIGTSVVTVNALSL---STLTYDI--RHGNGHRT------- 1749

  Fly   912 SSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDN 976
                     |.::...|.:...|.||.|.|....|.:|..::|.    |.:...:::.|||:|||
Zfish  1750 ---------FRINQYSGVITTQKSLDFETVSSYVLIVTASNMAG----QASNATITVVVLDQNDN 1801

  Fly   977 NPKFRLPFYRQSITE----NSI----NGAMIVNVLASDVDKNRT--ITYALEGNPTYRSLMHLDP 1031
            .|.|:...||.||:|    ||:    :|..:| :.|||.|:|..  :.|.:. ..:.|....:|.
Zfish  1802 APVFQQLHYRGSISEGAGLNSVVQSDDGQPLV-IRASDADRNHNALLVYQIM-EESARRFFAVDA 1864

  Fly  1032 QTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSS--LVDVYITVLDENDNNPYF---------- 1084
            .||.|...:::|||......|.|...|||.|..|:  ..:|.|.|.|.||.:|.|          
Zfish  1865 GTGSIRTIAQLDHETTPTFRFHVNVRDSGHPQLSAERPAEVTIEVQDVNDCSPKFSQDSYEAVLL 1929

  Fly  1085 -----------------------------VGGSK--------------------------NYTIS 1094
                                         ..||.                          |..:|
Zfish  1930 LPTYEGVEALQVFATDPDGNGQSELTYSLTDGSLEHFSIEPSTGLLTVRNSTFSKERFRFNVRVS 1994

  Fly  1095 ENAAPGTRVATLQAGDA-DSG--------------DFGKITFL---------------MDRISSQ 1129
            :.....|.:.|:...:| |||              :.|.||.:               ...:::.
Zfish  1995 DGRFSSTALVTVLVHEALDSGLAFTHSAYNANIEENNGNITTVAVVTALGNKLNEPLRYTLLNAG 2059

  Fly  1130 GKFTIDADTGVL-TVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAFKQVFISILDENDNPP 1193
            |||.|...:|.: ||...||||.|:.|.|:::|      |......|.|...|.:.:.|.|||.|
Zfish  2060 GKFRIKPTSGAIETVGVPLDREEKEEYGLLVQA------GREEDRLRVARALVRVQVTDVNDNAP 2118

  Fly  1194 E-VDLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITRGNKDGMFELRQIDAWNAQI 1257
            . |.||....:..| .|....:..:...|.|...  ||.:::.:.  ::.|.||:.::       
Zfish  2119 VFVGLPYYAAVQVE-AEPGTAIFRVTAVDRDKGL--NGEVNYFLQ--DELGHFEVDRV------- 2171

  Fly  1258 FASKSLRNRYG--------NYSLTITTRDMGLPA------------------------------- 1283
              |..||.|..        .|.:.:..||||.|.                               
Zfish  2172 --SGELRLRRAFEADLSSVEYQVLVFARDMGTPPLSSSVTFPVTVVNRAMPVFDRPFYSVKVSED 2234

  Fly  1284 ----------------------NIVHN-------------------------------------- 1288
                                  .|.|.                                      
Zfish  2235 IPVWTPILGINASSPEGQSVLYTITHGDPGTLFSIGFDTGVISVIAGLDYETSPAHRLIVRATDC 2299

  Fly  1289 --------TLDICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRL 1345
                    .:::.|.|.||:.|||.:|.:...  |.|:|.:||..||..|:|.|..:||.|||::
Zfish  2300 LTGARAEVDVEVTVLDVNDNPPVFEQPSYKAV--ISESAMIGTAALQVLATDSDSEKNAAVRYQI 2362

  Fly  1346 KPDPLGSYKMFEVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDY 1410
            .||...|...|.:|.|:|.:.....|:.|..:.:...::|.|.|.| .|||::.:|:.|.:.||.
Zfish  2363 IPDRTNSTDHFHIDSSSGLILTARSLDHETIQRYVFLVKATDNGFP-PLSSEVWVTVDVTDTNDN 2426

  Fly  1411 EPQF--MVNEISVNFTEHSDPGSERIKLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLD 1473
            .|.|  ::.|.|:|   ...|....:......|.|:.:.:       ::.|.:|:|||...|.||
Zfish  2427 APVFNQLLYEASIN---ELAPKGHFVTCIQASDADRSDAE-------RLQYGLVSGNERMLFELD 2481

  Fly  1474 PETHILTV--DRELDREVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNRLGGIVHNQQFGY 1536
            ..:.:||:  .|.:.|...| .||.|..     :|.:.....:..:.:|..|     :|:.||  
Zfish  2482 AASGVLTLSGQRRMQRMPSA-ITLNVSV-----SDGVFTSTAQVHVRVERAN-----LHSPQF-- 2533

  Fly  1537 DRFKHSRQLRSTESNEYGPEDAELLSYEAYDSSQEDP----------------------TGGLAT 1579
                 ::.:...:..|..|..:::::..|.|:   ||                      :.|..|
Zfish  2534 -----TQGMYEADVRENAPPGSKVIAIRAQDA---DPGPFGDVRYVLLSDAARDLFTIDSSGQIT 2590

  Fly  1580 THPELD-------------------STVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFM 1625
            |...||                   |....|:|.|:|.|||.|.|.:..:...:.:..:.|...:
Zfish  2591 TLERLDREERSEMVLSVAAVDAGGRSGYCSVRVTVIDENDNVPLFGASEYHASVRSEVEPGTLVI 2655

  Fly  1626 RVEATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEV--QLNFDPQKGMKGYFD 1688
            :|:|.|.|:..||::.|....|....::|.|:        :|.::|.|  :.||.|.:|  ....
Zfish  2656 QVQAWDLDQDANGQVSYSLYSEASLQVTELLD--------IDPDSGWVVTKGNFAPLRG--SVLS 2710

  Fly  1689 FVVLANDTSGMKDVAH----VFIYLLREDQKV------RFVFRLQPDEL---------------- 1727
            |:|.|:|  |...:.|    |:|::|..|..:      :|.|.: |:::                
Zfish  2711 FLVKASD--GGAPIRHSLVSVYIHVLSADAHIPSFSQPQFSFTV-PEDMPIGSLLGAVHLHTSTS 2772

  Fly  1728 -RSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVDKTKTDLYMHLVEREDNSIYEVSEVLKLID 1791
             .|...||...:....||  |.:.:.:.:.:.|.:...|.      ::||...||....|..|..
Zfish  2773 HSSLPVSFAAVIGQTPES--NSEGVFLVDKESGMIKLDKA------LDRELTQIYHFKVVAMLQQ 2829

  Fly  1792 SHIESLNGLFKELNVLD 1808
            ..:::::.:..|:.|.|
Zfish  2830 GRLDAVSAVDVEVKVQD 2846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 24/94 (26%)
Cadherin_repeat 179..276 CDD:206637 28/97 (29%)
Cadherin_repeat 287..388 CDD:206637 29/112 (26%)
Cadherin_repeat 397..506 CDD:206637 22/110 (20%)
Cadherin_repeat 514..617 CDD:206637 31/103 (30%)
Cadherin_repeat 625..742 CDD:206637 40/330 (12%)
Cadherin_repeat 751..853 CDD:206637 36/102 (35%)
Cadherin_repeat 865..976 CDD:206637 28/111 (25%)
Cadherin_repeat 985..1080 CDD:206637 35/106 (33%)
Cadherin_repeat 1090..1191 CDD:206637 32/131 (24%)
CA 1221..1302 CDD:214520 23/187 (12%)
Cadherin_repeat 1312..1409 CDD:206637 33/96 (34%)
Cadherin_repeat 1418..>1502 CDD:206637 22/85 (26%)
Cadherin_repeat 1617..1710 CDD:206637 26/98 (27%)
fat3aXP_017206475.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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