DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and LOC568600

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_009303578.2 Gene:LOC568600 / 568600 -ID:- Length:4670 Species:Danio rerio


Alignment Length:2477 Identity:556/2477 - (22%)
Similarity:855/2477 - (34%) Gaps:857/2477 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 SLVASNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYD-------------------PDND 96
            |:|..|...:|.||.::.:|...|  ..|..|..|.|:|..|                   |...
Zfish  1293 SIVDGNDDGKFVIDAKTAMVYSKK--MVTAGGYDILTIKAIDNGTPQKWSTARLHVEWIRKPVPS 1355

  Fly    97 PLT--------------------------------------FGKRNSHDSEIIRIENTGGNEAK- 122
            ||.                                      .|.|.|.:...|...:.|.|.:. 
Zfish  1356 PLALRFTAAVYNFTVVENAKVYESVGVVSVWQTETPLWFDIIGGRTSREKFYIPQSSCGANCSSD 1420

  Fly   123 ----------------IFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVEDINDNVPT 171
                            |.:|:.||.|.|..|.:.:.:||.    .|..|....:.|.|.|||.|.
Zfish  1421 SGNYDGPFDIQRGIGTIVIARPLDAETQSLYNMTVQVTDG----TNTATTQIYIKVSDSNDNTPI 1481

  Fly   172 FLPYQNAIEIPEGS-APGVVSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQGKGILRLQK 235
            |..:...:.:.|.: |...|..:.|.|.||.|  ::.|.:........:.....:.|.|::....
Zfish  1482 FSEHTYEVLVSEDTPADTEVLRVRARDRDERA--KLSYSIHSSVDPASMRMFRINPGTGVMYTAD 1544

  Fly   236 ELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAEDAPVGTKV 300
            .||||.::.:.|.::..|:  :.|.....|.|:|.::|..:|||.|.:....:.:.|.||.||..
Zfish  1545 RLDYEARTQHILTIMVKDQ--EFPYYRDLARIIVTLEDANNQPPIFTQTNYDSTVFESAPPGTSA 1607

  Fly   301 LRVRAIDGDRGINNPIAYSLEAND---LFDINPHTGIV-------------HTLT---------- 339
            |:|.|:|.|.|.|..|.||::|.:   :|.|:|.:||:             :|||          
Zfish  1608 LQVIALDRDFGRNREIVYSIDAGNTGGIFGIDPLSGIISVARELDLTTVGFYTLTVRATDGGTPP 1672

  Fly   340 -------------------KLDREEQSDQVN-----GAHILRISAT-------ELSKSNTQ---- 369
                               |..::|...::.     |..::.:.|.       |:.:.|.:    
Zfish  1673 LSSTTTCRIAISLSDFSSPKFAQQEYQAEITENVAVGTFVIIVCAISRSMLIYEIKEGNDERRFK 1737

  Fly   370 ------------------------------MAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNE 404
                                          ||.......|.:.|.|.||..|.|.:..|...::|
Zfish  1738 INRYTGVITTQKDFDFEMTSSYILVIQAVNMAGIASSVTVCIQVVDENDNPPVFQDLTYTGTISE 1802

  Fly   405 NAQTNT--------PLNF----------------IDEEVQNVVFDHDEGNNG----------TFR 435
            .|..|:        ||..                |.||...:.|..|.|...          ||.
Zfish  1803 AAHVNSVVMTEDGKPLVIEATDADKNHNALLVFQIVEETAKLFFTVDSGTGSVRTIAKLDYETFS 1867

  Fly   436 LFL------------------------------DPP---NDLFEIV------------------P 449
            .|.                              .||   .:.:|.:                  |
Zfish  1868 SFYFSVNVRDCGRPQLTAEKPAKVLIRVVNINDSPPQFSQEAYETILLLPTYVGVEVLRVEATDP 1932

  Fly   450 ELAVN------EANF----------MLRVKNSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQI 498
            ::..:      ::|.          :|.||||| |..:::.      |..:|.:...:.:|.|.:
Zfish  1933 DMTTDLMYYLADSNLEHFEMEPSSGVLTVKNSK-LSKDRYR------FNVKVSDGRYFCTALVTV 1990

  Fly   499 FIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNLN 563
            .:|:..|:...||||.|::||||||...|.::.|.||    |:.....::||.|..|.:  ..:.
Zfish  1991 LVREAMDSGLLFSQTSYSSSVLENSVNITTVSIVNAV----GNRLNEPLKYTLLNAGTS--FTIR 2049

  Fly   564 PITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQYET 628
            |.:|||   |..|..||||....:.|.|||.....|.......:.|::.|||||||.|....|..
Zfish  2050 PTSGVI---QTTGVPFDREQQELYELVVEASREYDQLRVARVTVRVEVEDVNDNAPEFVGLPYYA 2111

  Fly   629 ------------------------------KLLENQAEFET----------------------PL 641
                                          :|.||...||.                      ||
Zfish  2112 AVQVDAQPGSSIFQVSATDLDKGINGAVYYELKENHPHFEVNKLTGDLTLKKIFDADLSNVEYPL 2176

  Fly   642 QLEARDAD-------------------------------------------LNGT--ENSQVTYE 661
            .:.||||.                                           :|.|  |...:.|.
Zfish  2177 VVLARDAGYPFLFTVAELPVTVVNKAMPVFDKSFYGISVREDIGVSTPILCINATSPEGQNIIYT 2241

  Fly   662 IVEGLYRSNFTIDPQSGLLRPVHSFDFEELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPML 726
            ||||.....|.|...||::..::..|:|..   |:.|        .:||..|.|..||..     
Zfish  2242 IVEGDPYFQFDIGFDSGVISVIYPLDYETT---SNYR--------LTIRSTDTLTGARSE----- 2290

  Fly   727 STVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQT--- 788
               |.|.|.|.|||||||:|:.:.|:.|:||:...||||:::.|.|:| |..|||:.|.|.:   
Zfish  2291 ---VDVDIVVVDVNDNAPVFRNTSYSTTLPENTMIGSSVIRLLATDKD-SEKNNVISYEILSDGF 2351

  Fly   789 GAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVN 853
            .:.|.|.|:|.:|::..|.  .||.:||.|    ::..|.|.|.|..:.....|.||.:|  |||
Zfish  2352 NSTDYFHIDSTSGLLLTAR--LLDYELTSS----FSFIVRATDNGSPSQNCEVTVTVFLS--DVN 2408

  Fly   854 NKPPVLKEMPALQ--ILENTPVGTLVYRIQATDLDHK-------AIL------------------ 891
            :.||...: |..:  :.|..|.|.:|..|||:|||..       :||                  
Zfish  2409 DNPPSFNQ-PLYEAFVSELAPRGHIVTCIQASDLDSSDAESLRYSILSGDEKMNFVIDSQTGVIS 2472

  Fly   892 -----------RYKLNPEHCEG------------------------------------------- 902
                       .|.||....:|                                           
Zfish  2473 LSSQRRQGMRPTYNLNVSVSDGVFTNTAQVNIRVMGANLYSPVFSQRFYLAEVRENAPAGSRVIQ 2537

  Fly   903 ---RTEEGALVKSSEYDFL-----GAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGR 959
               ..|:..:.....|.|:     ..|.:.: :|.:...:.||||...:..:.:||..|... ||
Zfish  2538 VRATDEDSGIFGQIMYSFINDLGKSQFNIGA-DGLITTAQKLDRENPINRDIVLTVMALDGG-GR 2600

  Fly   960 QIAEGFLSIQVL--DENDNNPKFRLPFYRQSITENSINGAMIVNVLASDVDK--NRTITYAL--E 1018
               ..|.:::|:  |||||.|:||...||.||..|...|:::..:.|.|.|.  |..:.|:|  |
Zfish  2601 ---ASFCTVRVILADENDNAPRFRAMEYRVSIKANVPMGSLVTQIQAQDPDSGDNGRVAYSLYSE 2662

  Fly  1019 GNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSSL---------------- 1067
            .......::.::|.:|.:|....:.|.:...|:|.|:|||.|:||:.||                
Zfish  2663 ARLPLVDVLEIEPDSGWMVTKGSLAHLRGTVLSFFVKATDGGVPAKHSLVSAFIHVLPPDASVPS 2727

  Fly  1068 ----------------------------------------------------------------- 1067
                                                                             
Zfish  2728 FSQPQYSFTVPEDTPVGTALGSVYLSPGQTALFSVVNGETGESNQSGTFLVERETGLLRLVSPLD 2792

  Fly  1068 -------------------------VDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQ 1107
                                     |||.:.|||.|||.|.|...|....:.|....||||..::
Zfish  2793 YELTNIYHFKVAATMRQALVESMSVVDVEVKVLDVNDNKPLFETSSYVAMVMEGMPRGTRVIQVR 2857

  Fly  1108 AGDADSGDFGKITFLMDRISSQ-----------GKFTIDADTGVLTVADRLDRESKDSYNLVIEA 1161
            |.|.|.|..|::.:.:....:|           ..|.||:.||.:|....||.|...||...:.|
Zfish  2858 ALDPDWGSNGQVNYSLGPTLNQEQEKASGSVAGAMFVIDSKTGWITTLGDLDHEICPSYTFNVVA 2922

  Fly  1162 WDNYQFGFLAGESRNAFKQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDADDPT 1226
            .|..:     |.|.::...|.::|.|.|||||..:.......:.|...|.|.|:.:..:|.|. :
Zfish  2923 SDLGE-----GVSLSSTAVVTVAIADVNDNPPTFEREYYRGAVRESDPLGEVVSVLSTRDGDS-S 2981

  Fly  1227 TPNGRLDFAITRGNKDGMFELRQIDA-WNAQIFASKSL-RNRYGNYSLTITTRDMGLPANIVHNT 1289
            ..|..:.|.||.||..|:|.|..|.. |  :::..:.| |.....|.|.||..| ||  .:....
Zfish  2982 DQNRLVSFHITGGNPKGVFALAPIQGEW--KVYVKRPLDREEQDQYLLNITASD-GL--FVTRIG 3041

  Fly  1290 LDICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRL--------- 1345
            :::.|.|.||::|:..:..:..:  .||:..|.|.||:..|:|.|.|.||.::|.|         
Zfish  3042 VEVTVMDANDNSPICNQAEYKAS--FPEDVAVNTAILKVGATDLDTGANAEIQYSLFGIGVEDFF 3104

  Fly  1346 ----------------------------------------------------------------- 1345
                                                                             
Zfish  3105 MDANSGELKTAALLDRERTAGYMLIAQATDGGGLFCRSEISLTILDVNDNAPSFAFTRFMASVYE 3169

  Fly  1346 --------------KPDPLGSYK-----------MFEVDGSTGELFLKEQLNREKQKIHEIRIEA 1385
                          .||...:.|           :|.:|.|:|.:.|::.|:||.|.:::|||:|
Zfish  3170 SAAPKALLTRLQANDPDEGLNRKIVYSLVDSAGGVFSIDPSSGLVMLEKTLDREVQDLYQIRIKA 3234

  Fly  1386 YDQ-GLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERIKLPDTIDKDQLELDD 1449
            .|: |...|||:.:||||.|.:|||..|.|...:.||...|....|:|.:::        :....
Zfish  3235 ADRAGAEGSLSAQVDLTIMVLDVNDNPPVFEKQDYSVTVPEDVAVGTELLRV--------IATSG 3291

  Fly  1450 PNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRATENCRNDSISGGEKR 1514
            .....:::.|.|::|||.|.|.:|....|::|..:||.|:..:|.|.|.|        ..||...
Zfish  3292 DIGVNAEIYYRILSGNELGKFSIDDSRGIISVADDLDYEICKDFFLNVEA--------FDGGSPP 3348

  Fly  1515 RRMGIEINNRLGGIVHNQ-QFGYDRF----KHSRQLRSTESNEYGPE-DAEL---LSYEAYDSSQ 1570
            .|..|.:...|..:..|. .|..:.:    .....:..|.:..:..: |:::   ::|......:
Zfish  3349 LRAAIIVTIELLDVNDNSPSFSEEIYNVLISEDIAIGETVTRLFAEDLDSQINGRITYSILKGDR 3413

  Fly  1571 E-----DPTGGLATTHPELD---------------------STVIKVKVRVLDINDNPPRFRSKI 1609
            |     ||..||...:..||                     ||.:.|.:.:.|:|||||.|....
Zfish  3414 ENQFWIDPVTGLLKVNKALDRETVSSYSLSVQAFDSGSPAKSTTVNVNIEIADVNDNPPLFSPAN 3478

  Fly  1610 FTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQ 1674
            .:..|..|...|...:.:..:|.|...||       |.....|..|.|.   ..|.||| .||::
Zfish  3479 ASAVIQLNKPAGRTILTLSVSDKDSTRNG-------GPFEFRLVSGNEG---NAFSLDQ-NGELR 3532

  Fly  1675 LN--FDPQKGMKGYFDFVVLANDTSGMKDVAHVFIYLLREDQKVRFVF-RLQPDELRSRVDSFRD 1736
            .:  |.|....:  :...:.|.| ||...::           ...||| |:..|.|      |:.
Zfish  3533 TSQAFGPDATRE--YTLEIQARD-SGKPRLS-----------STSFVFVRVIGDSL------FKP 3577

  Fly  1737 TLSNITESIVNIDEIKVHENKDGSVDKTKTDLYMHLVEREDNSIYEVSE------VLKL--IDSH 1793
            ....:..|||...::    ...|.:.|      ::..:|:||.:...|:      :.|:  .|..
Zfish  3578 VAFPLEISIVMAADV----FPGGIIGK------VYATDRDDNDVLSFSQRPQSKSLFKINRQDGK 3632

  Fly  1794 IESLNGL 1800
            |.:||||
Zfish  3633 IVALNGL 3639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 29/165 (18%)
Cadherin_repeat 179..276 CDD:206637 22/97 (23%)
Cadherin_repeat 287..388 CDD:206637 35/191 (18%)
Cadherin_repeat 397..506 CDD:206637 32/209 (15%)
Cadherin_repeat 514..617 CDD:206637 35/102 (34%)
Cadherin_repeat 625..742 CDD:206637 41/213 (19%)
Cadherin_repeat 751..853 CDD:206637 37/104 (36%)
Cadherin_repeat 865..976 CDD:206637 35/201 (17%)
Cadherin_repeat 985..1080 CDD:206637 35/204 (17%)
Cadherin_repeat 1090..1191 CDD:206637 30/111 (27%)
CA 1221..1302 CDD:214520 26/82 (32%)
Cadherin_repeat 1312..1409 CDD:206637 41/196 (21%)
Cadherin_repeat 1418..>1502 CDD:206637 22/83 (27%)
Cadherin_repeat 1617..1710 CDD:206637 22/94 (23%)
LOC568600XP_009303578.2 Cadherin_repeat 46..152 CDD:206637
Cadherin_repeat 161..260 CDD:206637
Cadherin_repeat 282..365 CDD:206637
Cadherin_repeat 378..467 CDD:206637
Cadherin_repeat 476..573 CDD:206637
Cadherin_repeat 591..671 CDD:206637
Cadherin_repeat 731..825 CDD:206637
Cadherin_repeat 833..929 CDD:206637
Cadherin_repeat 938..1035 CDD:206637
Cadherin_repeat 1047..1142 CDD:206637
Cadherin_repeat 1150..1249 CDD:206637
Cadherin_repeat 1257..1347 CDD:206637 14/55 (25%)
Cadherin_repeat 1365..1478 CDD:206637 20/116 (17%)
Cadherin_repeat 1486..1582 CDD:206637 22/99 (22%)
Cadherin_repeat 1593..1681 CDD:206637 24/87 (28%)
Cadherin_repeat 1697..1787 CDD:206637 11/89 (12%)
Cadherin_repeat 1795..1900 CDD:206637 15/104 (14%)
Cadherin_repeat 1920..1997 CDD:206637 14/83 (17%)
Cadherin_repeat 2006..2100 CDD:206637 35/102 (34%)
Cadherin_repeat 2108..2199 CDD:206637 12/90 (13%)
Cadherin_repeat 2211..2289 CDD:206637 21/88 (24%)
Cadherin_repeat 2311..2410 CDD:206637 39/107 (36%)
Cadherin_repeat 2419..2510 CDD:206637 16/90 (18%)
Cadherin_repeat 2521..2616 CDD:206637 19/99 (19%)
Cadherin_repeat 2624..2719 CDD:206637 28/94 (30%)
Cadherin_repeat 2732..2830 CDD:206637 7/97 (7%)
Cadherin_repeat 2838..2947 CDD:206637 31/113 (27%)
Cadherin_repeat 2956..3052 CDD:206637 29/101 (29%)
Cadherin_repeat 3060..3154 CDD:206637 14/95 (15%)
Cadherin_repeat 3165..3260 CDD:206637 28/94 (30%)
Cadherin_repeat 3269..3365 CDD:206637 27/111 (24%)
Cadherin_repeat 3373..3470 CDD:206637 15/96 (16%)
Cadherin_repeat 3480..3570 CDD:206637 27/114 (24%)
Cadherin_repeat 3591..3670 CDD:206637 13/59 (22%)
LamG 3871..4028 CDD:238058
EGF_CA 4059..4094 CDD:238011
EGF 4100..4128 CDD:306513
EGF_CA <4146..4169 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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