DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and fat2

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_001920058.2 Gene:fat2 / 568468 ZFINID:ZDB-GENE-111031-1 Length:4342 Species:Danio rerio


Alignment Length:1948 Identity:506/1948 - (25%)
Similarity:802/1948 - (41%) Gaps:338/1948 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TTLISLVASN-RPPRFAIDGQSEIVLRLKESPETKV-------GTLIYTLKGYDPDNDPLTFGKR 103
            ||::.|..:| .......:.::.:...|:.|...|:       ||.:         |:||.|...
Zfish  1949 TTVVKLNITNATKSSLKFEDRAHVATVLENSTSVKILVVLRATGTYL---------NEPLQFTVL 2004

  Fly   104 NSHDSEII-----RIENTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVE 163
            |.|....:     .:..||         ...|||.||.|.:.:.:.|........||. ..:.::
Zfish  2005 NPHGKFAVIPSSGVLHTTG---------VPFDREEQDVYDVAVEVRDFRSPPRVDVTH-VKVYID 2059

  Fly   164 DINDNVPTFLPYQNAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQG 227
            |:|||||..|.....:.|.:.:.|| |:..:.|||.|.|..|.:::.|::   |..:|.|..:.|
Zfish  2060 DVNDNVPEILNLPKTLLISDETEPGDVLFQVLATDNDFGENGSIIFSLED---DFGLFRIDLYLG 2121

  Fly   228 KGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAE 292
            .  :.||:.||:|..:.|.|.||..|.........||..|.|:.:    ..|.|..:....::.|
Zfish  2122 D--VSLQRPLDFESMNKYVLTVLVSDDGQPSLSAIGTIYIQVQNR----SHPIFQSMYYPLKLPE 2180

  Fly   293 DAPVGTKVLRVRAIDGDRGINNP----IAYSLE---ANDLFDINPHTGIVHTLTKLDREEQSDQV 350
            :....|.:|.|:|       .||    :.|:||   |:.||:|:..||::.....||.|.::   
Zfish  2181 NITPFTTILHVQA-------RNPEGYRLIYNLEEDNASRLFNIDFKTGVLSVTDFLDFESET--- 2235

  Fly   351 NGAHILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFI 415
              .|||.:.||:      .::.|....:|.:.|.|:||..|.|....|..:|.|.....|.:   
Zfish  2236 --KHILTVRATD------SVSGTFAEAKVEIDVEDINDNAPVFQNLSYVADVFEGLPIGTSV--- 2289

  Fly   416 DEEVQNVVFDHDEGNNGTFRLFLDPPNDLFEIVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTI 480
             .:|..|..|.|:....|::| :|..:..|||.|...|        :..::.||:|...:....:
Zfish  2290 -LQVSAVDRDADKNAEATYQL-IDKESHFFEIDPLSGV--------LVTTQVLDYESTQQFTLKV 2344

  Fly   481 FAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTM 545
            .|.:...|.....||:.:.:.|.|||.|:||:..|.||:.|.:....|:..|||.|.||.|    
Zfish  2345 KATDKGVPPLSGEAHIIVNVIDVNDNPPDFSEPSYRASLDEMATCGNIVIKVQASDPDSKD---- 2405

  Fly   546 GIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVD 610
            .::|..|.|.......:|..:|:|:.    .....|.:...:.|||...|...|   .||.:.:|
Zfish  2406 DLQYKILSGNEGRYFAINESSGLISF----SNVCKRNLDPFYNLTVAVSDGVFQ---KTAPVNID 2463

  Fly   611 ILDVNDNAPTFPQRQYETKLLENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFTIDP 675
            :.:.|..:|.|.|..||..|.||.......::|.|.|.| :|...| |.|.|:..|....|.|:.
Zfish  2464 MTNGNKYSPYFTQNIYEADLAENAEVGTRVIRLAAIDPD-DGPYGS-VDYTIINKLADEKFAINE 2526

  Fly   676 QSGLLRPVHSFDFEELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVN 740
                             ||....|.|....:.|.|.|.:.:.|:|.|..:....|.:::  .|.|
Zfish  2527 -----------------DGQIVTSQPLDRENPSQRVIAIKIMAKDGGGRVGFCTVKIIL--TDEN 2572

  Fly   741 DNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTG---AGDKFIINSETGV 802
            ||.|.|:.|.|..::...:..||.|:|:.|.|.| ...|..|.|.::..   ..|...:|..|||
Zfish  2573 DNVPQFKASEYDISIQSTVNKGSPVIQIMAYDAD-EGKNADVTYTVEEADEVTEDIIEVNPFTGV 2636

  Fly   803 ISVAHGANLDPDLTESKRSLYTLSVIALDGGLG--NSQLMTTCTVNISIQDVNNKPPVL------ 859
            :||..      .|...:..::...|.|.|||..  ||      :|.:.::.|   ||.:      
Zfish  2637 VSVKE------SLVGLENKIFNFKVKARDGGFPFYNS------SVPVQVKVV---PPEIILPRFT 2686

  Fly   860 KEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVD 924
            :.:.:....|:.|:|   |.|.....|....|.|.|    ..|.|    |..:.|.    :|.:|
Zfish  2687 EPLYSFSASEDLPIG---YEIGTVKADADMPLIYSL----VNGNT----LDSNKEL----SFAID 2736

  Fly   925 SIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGRQIAE-GFLSIQVLDENDNNPKFRLPFYRQS 988
            ...||:.:...:|.|:.:..|:.:..:  ....|..:|. ..:.|:|.|.|||.|.|....|:..
Zfish  2737 KDGGTVVLQNNIDHEKTKMYKIDVIAQ--GNHNGTNVASLVSVHIEVQDVNDNKPMFEADTYKAF 2799

  Fly   989 ITENSINGAMIVNVLASDVDK--NRTITYALE-GNPTYRSLMHLDPQTGEIVVASKIDHEQHQWL 1050
            :.||..:|..::.|.|:|.|.  |..::|.|| .:.....:..:|.|||.|....:.|.|..|..
Zfish  2800 LAENLPSGTTVIQVTANDADANINGEVSYTLEPESDDIGDMFAIDSQTGWITTLKEADSETKQLH 2864

  Fly  1051 NFSVRATDSGIPAR-SSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDAD-S 1113
            .|.|.|||.|...: |:.|.|.:|:.|||||.|.|.......:|.||:.||..:.||...|.| |
Zfish  2865 RFFVVATDHGDALKQSASVLVEVTLTDENDNPPQFTEELYQGSILENSRPGENIVTLTTADKDVS 2929

  Fly  1114 GDFGKITFLMDRISSQGKFTIDADTGVLTVADR--LDRESKDSYNLVIEAWD-NYQFGFLAGESR 1175
            .:..:|...:......|:|::.|.....||..:  ||||.||.|.|.|.|.| .:|      .|.
Zfish  2930 AENRQIVCYITDGDPLGQFSVTAVGEEWTVISKSPLDREDKDKYTLKIIATDGRFQ------TSA 2988

  Fly  1176 NAFKQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITRGN 1240
            |    |.:.:||.|||.|..:.......:.|.....:.:..|...|.|..|  ||::.|.:...|
Zfish  2989 N----VEVHVLDLNDNSPFCEQLQYTEAVMENSSSGKVILKISASDPDIGT--NGQVSFTLHGPN 3047

  Fly  1241 KDGMFELRQIDAWNAQIFASKSL-RNRYGNYSLTITTRDMGLPANIVHNTLDICVSDFNDHAPVF 1304
            .|..    .:|....::|....| |.|...|.|.:...|.|  .......:.:.|.|.||:.|.|
Zfish  3048 ADKF----HLDPKTGELFTLAVLDREREKEYDLVVKATDGG--GRSCQADVTLMVQDMNDNPPQF 3106

  Fly  1305 VRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKE 1369
            ....:..||.  :|.|:.|.|...||.|.|.|.|:.|||.|:....|   .|.:|..:|.|.|:.
Zfish  3107 STSHYEVTVF--DNTTIRTPIAVIYAKDPDTGINSEVRYSLQGADSG---FFSLDEISGVLRLER 3166

  Fly  1370 QLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERI 1434
            .|..|.:..:|::::|.|:|||..|.|...:|::|..::||:|.|:.:|.||...|.|..|||.|
Zfish  3167 SLADETKSTYEMKVKATDRGLPRHLFSFAMITVHVVILSDYQPLFLSSEYSVQIAESSQVGSEVI 3231

  Fly  1435 KLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRA 1499
            .: ..:.||..| ::|      |.|.|::|||.|.|.::|.|.:|:|...||             
Zfish  3232 SV-SALTKDATE-NEP------VRYSIISGNEDGRFMINPVTGLLSVKAALD------------- 3275

  Fly  1500 TENCRND--SISGGEKRRRMG------IEINNRLGGIVHNQQFGYDRFKHSR------------- 1543
            .|.||..  |:.|...:..:.      |.|.:     |::....::|..:|.             
Zfish  3276 FERCREYYLSVEGARGKPLLSDIAMVIINITD-----VNDNPPVFNRSSYSTVIPEDISPGEMAL 3335

  Fly  1544 QLRSTESNEYGPEDAELL-SYEAYDSSQE---DPTGGLATTHPELD------------------- 1585
            |:|:.:.:  ||.:..:: |..:.|..|:   ||..|..|....||                   
Zfish  3336 QVRAIDLD--GPPNNFIIYSIVSGDPKQQFSIDPRTGFITLRSMLDREEITHYSLTVQAADEGDP 3398

  Fly  1586 --STVIKVKVRVLDINDNPPRFRSKIFTGGITTNAD-FGLKFMRVEATDADEGDNGRIGYYQVGE 1647
              |:.::|.|.|.|:|||||.| |||....|....: .|...:::..||.|...||....:.:..
Zfish  3399 PLSSAVQVTVTVSDVNDNPPMF-SKINHSLIVQEGEAVGSGILQLLVTDRDTPQNGPPFSFHIVS 3462

  Fly  1648 IRQTLSEGLENVRKAPFLLDQ-----ETGEVQLNFDPQKGMKGYFDFVVLANDTSGMKDVAHVFI 1707
            ..:..|          |.:||     .:.:::....||..:|      :...| ||...::.:.:
Zfish  3463 GNEDRS----------FHIDQGGLLSVSSQLRRRGKPQHLLK------IQVTD-SGHPPLSSICV 3510

  Fly  1708 YLLREDQKVRFVFRLQPDELRSRVDSFRDTLSN-ITESIVNIDEIKVHENKDGSVDKTKTDL--Y 1769
            ..:...::.|:...:.|.|:      |..|... |.:|:::    |:|     :.|:...|:  |
Zfish  3511 VKINITEQSRYPPTVNPLEI------FITTAGGPILKSVIS----KLH-----ATDQDPQDVLSY 3560

  Fly  1770 MHLVEREDNSIYEVSEV--LKLIDSHIESLNGLFKELNVLDTQAAEAQLLTAGPSRGPLFVWL-I 1831
            ..:.|.:|..::.|..|  ..:::.:::.  ||: .|||..|.             |...:|. :
Zfish  3561 KLVSEGQDKGLFSVDTVDGKIVVEKNLDP--GLY-HLNVSVTD-------------GKFSIWAGV 3609

  Fly  1832 FTNLFLATLLVVTIALCASQRN---GYRRQLRAAKVNIFRGHSSMSLQDAQEPATRVPNTNKH 1891
            ..:::.||           |:|   |:..||.......|.......||.:......:|....|
Zfish  3610 KVHVWAAT-----------QQNLDQGFTLQLAGISAEEFVSDHWRGLQRSLAQELNIPRQELH 3661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 23/103 (22%)
Cadherin_repeat 179..276 CDD:206637 29/97 (30%)
Cadherin_repeat 287..388 CDD:206637 28/107 (26%)
Cadherin_repeat 397..506 CDD:206637 25/108 (23%)
Cadherin_repeat 514..617 CDD:206637 28/102 (27%)
Cadherin_repeat 625..742 CDD:206637 30/116 (26%)
Cadherin_repeat 751..853 CDD:206637 27/106 (25%)
Cadherin_repeat 865..976 CDD:206637 26/111 (23%)
Cadherin_repeat 985..1080 CDD:206637 33/98 (34%)
Cadherin_repeat 1090..1191 CDD:206637 34/104 (33%)
CA 1221..1302 CDD:214520 21/81 (26%)
Cadherin_repeat 1312..1409 CDD:206637 34/96 (35%)
Cadherin_repeat 1418..>1502 CDD:206637 27/83 (33%)
Cadherin_repeat 1617..1710 CDD:206637 16/98 (16%)
fat2XP_001920058.2 Cadherin_repeat 40..145 CDD:206637
Cadherin_repeat 154..249 CDD:206637
Cadherin_repeat 369..456 CDD:206637
Cadherin_repeat 464..562 CDD:206637
Cadherin_repeat 572..662 CDD:206637
Cadherin_repeat 721..816 CDD:206637
Cadherin_repeat 825..921 CDD:206637
Cadherin_repeat 929..1026 CDD:206637
Cadherin_repeat 1038..1133 CDD:206637
Cadherin_repeat 1141..1237 CDD:206637
Cadherin_repeat 1246..1334 CDD:206637
Cadherin_repeat 1352..1442 CDD:206637
Cadherin_repeat 1451..1548 CDD:206637
Cadherin_repeat 1556..1649 CDD:206637
Cadherin_repeat 1662..1752 CDD:206637
Cadherin_repeat 1760..1865 CDD:206637
Cadherin_repeat 1889..1957 CDD:206637 3/7 (43%)
Cadherin_repeat 1972..2064 CDD:206637 24/110 (22%)
Cadherin_repeat 2074..2162 CDD:206637 28/92 (30%)
Cadherin_repeat 2174..2266 CDD:206637 29/109 (27%)
Cadherin_repeat 2274..2370 CDD:206637 25/108 (23%)
Cadherin_repeat 2378..2468 CDD:206637 27/100 (27%)
Cadherin_repeat 2478..2574 CDD:206637 30/116 (26%)
Cadherin_repeat 2582..2668 CDD:206637 26/98 (27%)
Cadherin_repeat 2690..2787 CDD:206637 26/113 (23%)
Cadherin_repeat 2795..2895 CDD:206637 33/99 (33%)
Cadherin_repeat 2904..3000 CDD:206637 34/105 (32%)
Cadherin_repeat 3008..3102 CDD:206637 22/101 (22%)
Cadherin_repeat 3110..3206 CDD:206637 34/100 (34%)
Cadherin_repeat 3215..3311 CDD:206637 35/121 (29%)
Cadherin_repeat 3319..3416 CDD:206637 20/98 (20%)
Cadherin_repeat 3429..3516 CDD:206637 16/103 (16%)
Cadherin_repeat 3542..3613 CDD:206637 18/95 (19%)
LamG 3766..3912 CDD:238058
EGF_CA 3941..3978 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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