DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and dchs1b

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_021327955.1 Gene:dchs1b / 553300 ZFINID:ZDB-GENE-050208-41 Length:3298 Species:Danio rerio


Alignment Length:2329 Identity:570/2329 - (24%)
Similarity:893/2329 - (38%) Gaps:613/2329 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GNGIDS---MDYKKVRLKGQRR--RSFSSYISSISIQVIILTTLISLVA---SNRPPRFAIDGQS 67
            |.||.|   :|.....:|..||  |....:.|.|::.:...|..:|:..   ::..|.|.   :.
Zfish    86 GTGIGSDLHIDETTGIIKTARRLDREERDHYSFIAVTMTGFTVKVSITVNDINDHAPTFP---KK 147

  Fly    68 EIVLRLKESPETKVGTLIYTLKGYDPDNDPLT---FGKRNSHDSEIIRIENTGGNEAKIFL---- 125
            :..|::.|  :|.|||........|.|.|.||   :..:..:..::.|:|........::|    
Zfish   148 KASLKIPE--QTAVGTKFSLEPATDSDKDQLTVQGYQIKEGNVGQVFRLETKRAANKVLYLDLVV 210

  Fly   126 AKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFL-LLVEDINDNVPTFLPYQ-NAI---EIPEGS 185
            ...||||.:..|::|:...|......|  .|..| :||:||||:.|.|...: |||   .:|:||
Zfish   211 NGVLDREKRSSYSLVVEAFDGGSPRQN--GQMTLDILVQDINDHAPVFNQSRYNAIISESLPQGS 273

  Fly   186 APGVVSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQGKGILRLQKELDYERKSLYQLRVL 250
            .   :..:.|:|||||..|.|:|.:.....|.|.:.:...: .||:.|.|.||||.:.:::|.|.
Zfish   274 N---ILQVFASDADEGDNGLVLYEINRRQSDPDRYFVIDPR-SGIITLNKALDYEMRKVHELVVQ 334

  Fly   251 AIDRANQGPINTGTAAILVKVKDLEDQPPE----FVEVQAVARIAEDAPVGTKVLRVRAIDGDRG 311
            |.|.|:...|.  .|.:.:.|:|..|..|.    |:......:|:|.|..|..|.|:...|.|.|
Zfish   335 AKDNASHPEIT--NAFVTIHVRDYNDNQPTMTIIFLSEDGSPQISEGAQPGQYVARISVSDPDYG 397

  Fly   312 INNPIAYSLEAND-LFDINPHTGIVHTL---TKLDREEQSDQVNGAHILRISATELSKSNTQMAP 372
            ..:.:..|||..| .|.:.....|::.:   ..|||||:.     ::.||:.||:   |.|  .|
Zfish   398 EYSNVNVSLEGGDGKFALTTKDSIIYLIYVDQILDREERD-----SYELRVMATD---SGT--PP 452

  Fly   373 TTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLF 437
            ....:..|:.|:||||..|.|.:..|:..:.|...   |.:|:   :|....|.|:|.||..|  
Zfish   453 LHAESSFTIHVTDVNDNPPLFDQQAYKQTIPEVVY---PGSFV---LQVTARDKDQGPNGDIR-- 509

  Fly   438 LDPPNDLFEIVPELAVNEANFMLR-----VKNSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQ 497
                   :.|:|:...:.:.|.:.     :..:..||:|...:.:..:.|.:...|...|:|.|:
Zfish   510 -------YSILPDKKTHSSWFTIDPVTGIITTATKLDYETNPKPSIKVVATDGGRPPLSSTAVVE 567

  Fly   498 IFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNL 562
            |.::|.|||.|.|..:.||.|:.||:...|....|:|.|.|.|.:||  |.|:...|.::     
Zfish   568 IDLQDTNDNEPVFGSSFYNVSIKENTSAGTCFLEVKADDADGGSFGT--ITYSIGSGSVS----- 625

  Fly   563 NPITGVITIKQAG----GTAFDR-EIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFP 622
            .|::.....|::|    .||.|| |.....:.||.|.|  |.|..::|.::|.:.|:|||.|:|.
Zfish   626 APLSQFSINKESGQICTSTALDRDEGADSFHFTVTATD--GGGLSSSASVLVSLEDINDNRPSFY 688

  Fly   623 QRQYETKL-----------------------------------------------------LENQ 634
            ...|...|                                                     |..:
Zfish   689 PLNYAVSLSTQSSPGTSVIRVTAHDPDAGANGRVTYHTVSGGGSSFFTLNKDTGVISLSRSLHGK 753

  Fly   635 AEFETPLQLEARDAD-------------------------------------LNGTE-------- 654
            |....|:.:.|||..                                     |.|||        
Zfish   754 ANSVIPMVISARDGGGLTAPVNARVNISVVGGSVAPPVFEQAQYFFTVSEDVLRGTEVGVVRASS 818

  Fly   655 ----NSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSFDFEE------------------------- 690
                :..|||.|..|.....|.:||::|.||.....|.|.                         
Zfish   819 RNGVSKDVTYTISAGDPDGYFMVDPETGALRTSLPLDHESRPFFDLEIQARSGSPPAFGDTRVRV 883

  Fly   691 ---------------------------------LVDGSSRRSDPYTGGSF--------------- 707
                                             .|....|.|.|....||               
Zfish   884 TIADVNDNAPIFFPSSSESLLLPEATKMGTIVYRVQAEDRDSGPNGQLSFDLISSGGQRTFGVER 948

  Fly   708 --------------SIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPED 758
                          |:...||.|.|:|||.|.||....:::::|..|:..|:|....|...:.|:
Zfish   949 SSGEVRLIGSLSYDSVPRYDLQVIAKDSGAPQLSATFSLVVHIQAENNQGPVFDTITYRVELKEN 1013

  Fly   759 LPGGSSVLQVTAIDRD------GSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPD--- 814
            .|..::.|||.|::||      .|.|.:.:.||::.. ||             |.|..:.||   
Zfish  1014 TPLNTNFLQVRALNRDPNGNGGSSTPTSTLAYRLRPD-GD-------------AVGFGIAPDSGW 1064

  Fly   815 ------LTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVN-NKPPVLKEMPALQILENTP 872
                  |....:.:|.|:|:|..|. |......:.|:.:|:.|.| |.|...:|...|.:.||.|
Zfish  1065 LFVKSALDREVKDIYLLTVLATSGS-GQMGRTGSATIRVSVTDENDNAPRFSQERVFLAVRENLP 1128

  Fly   873 VGTLVYRIQATDLDH--KAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVDSIEGTLKVVKL 935
            .||...|:.|||.|.  .:.|.|:              |:.:..|     |:::|..|.:.....
Zfish  1129 AGTGFGRVSATDRDAGLNSRLTYR--------------LLHTDRY-----FQINSQTGEISTRAA 1174

  Fly   936 LDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQ-------SITENS 993
            ||||.....:|.:.|:|  .....:.|.|...|.|||||||.|.|.   :.|       .:.|..
Zfish  1175 LDREHQSSYQLMVVVQD--GGTPPRSATGTAHITVLDENDNAPAFS---HTQPGREILIQVQEGL 1234

  Fly   994 INGAMIVNVLASDVD--KNRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRA 1056
            ..|:::..:.|.|.|  :|.||.|:|.|:...|  ..|:|.|||:..:|.:...:....:|::.|
Zfish  1235 PAGSLLGTLNAKDPDEGENGTIFYSLSGSRAER--FSLNPNTGELRSSSPLRRAEKAEYSFTITA 1297

  Fly  1057 TDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTIS------ENAAPGTRVATLQAGDADSGD 1115
            :|.|.|::||...:.|.|:.....:|      |..|:|      |.|.||:.:.:::|.|.....
Zfish  1298 SDRGAPSQSSSAVLLIQVIGSTRISP------KPNTLSMTLNSVEGAKPGSVIGSVRAHDQREVT 1356

  Fly  1116 F-GKITFL-MDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAF 1178
            . |::|:| :.....:|.|.:|..||.:.:|..||.|....|.|.||..|     |.........
Zfish  1357 LNGQVTYLVVGGTDHEGTFMVDRLTGDVYLARELDYEKGSRYTLQIEVDD-----FSKAYPNTHM 1416

  Fly  1179 KQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITR---GN 1240
            .|:.|::.|.||:.|:.......::|.|..:....|.:....|.|. :.||..:.:::.:   .|
Zfish  1417 IQLEINVQDSNDHAPQFPEDPVTIVIPENTQAGSSVYTFQATDKDG-SGPNSEIRYSVQQRWPDN 1480

  Fly  1241 KD--------GMFEL-RQIDAWNAQIFASKSLRNRYGNYSLTITTRDMGLPAN-----IVHNTLD 1291
            .|        |:.:| |::|            .....:..|.:...|..|..|     .|  |..
Zfish  1481 PDLFNLDPVTGVLKLGRELD------------HEETSSLFLVVQAMDSALDPNQRLWGSV--TAR 1531

  Fly  1292 ICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMF 1356
            :.|:|.||:||:|..|   |.|.:.|:..||.::|...|.|.|.|:|..|.||::..  .:...|
Zfish  1532 VFVTDENDNAPIFSSP---TAVSVMEDQPVGFVLLYVMAWDADQGENGRVSYRIQSG--NTAGRF 1591

  Fly  1357 EVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISV 1421
            .:..::|.|.:.:.|:||:|:.:.:.|.|.|.|:|...::.: |:|.|.:|||..|.|..||...
Zfish  1592 VLSSNSGSLSILKPLDREEQESYNLTIVAEDHGIPQHSTTQV-LSIQVIDVNDEAPWFERNEFEA 1655

  Fly  1422 NFTEHSDPGSERIKLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELD 1486
            ...|:...|:..|::..: |:|       :.|...|.|   .|.....|.::.||.:::..|.||
Zfish  1656 QIRENQPAGTSIIQVTAS-DRD-------HGTNGLVTY---GGVTEDGFTINAETGVISATRVLD 1709

  Fly  1487 REVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNRLGGIVHNQQFGYDRFKHSRQLRSTESN 1551
            ||:..::|:.|.|.:                        |||..|  |.    |....:...:.|
Zfish  1710 RELQDHYTITVYAKD------------------------GGIPPN--FA----KAKVHITVLDEN 1744

  Fly  1552 EYGP---------------EDAELLSYEA------------YDSSQEDP---------TGGLATT 1580
            :..|               :..||.:.:|            |.....||         :|.|:|:
Zfish  1745 DNAPAFGLQQYSLEVPENLQPVELFTLKATDRDIGESGRLEYKIKAGDPDGDFRLDGSSGALSTS 1809

  Fly  1581 H---------------------PELDSTVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKF 1624
            .                     |.|:||. .|::.|||:|||.|:|.|..:|..::.:|..||..
Zfish  1810 RPLDRERKSSYSLQVVVQDHGSPSLNSTA-SVEISVLDVNDNSPKFSSSSYTVDVSEDAAIGLVV 1873

  Fly  1625 MRVEATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLN--FDPQKGMKGYF 1687
            :...|||.|||.||:|.|:            |....|..|.:|..||.:...  .|.:| ...||
Zfish  1874 LDATATDVDEGQNGQILYF------------LSQEAKGAFTVDPNTGRITTAALLDREK-RASYF 1925

  Fly  1688 DFVVLANDTS---GMKDVAHVFIYLLREDQKVRFVFRLQPDELRSRVDSFRDTLSNITESIVNID 1749
             |.|.|.|.|   .....|.|.:.:|..:....|..:   |.|...|.|.    |..|..:|...
Zfish  1926 -FQVYAVDLSPAAPRNSTAQVTVTILDVNDNAPFFIQ---DPLIINVSSG----SVFTHQVVATM 1982

  Fly  1750 EIKVHENKD----GSVDKTKTDLYMHLVEREDNSIYEVSEVLKLIDSHIESLNGLFKELNVLDTQ 1810
            ..   |:||    |||      .|...:.....:|..::..::.    .|:|..|.:....|..:
Zfish  1983 RA---EDKDFGANGSV------FYRFAMPVRGFAINSLTGAIQT----TENLQTLTQTQRTLIVE 2034

  Fly  1811 AAEAQLLTAGPSRGPLFVWLIFTN-------LFLATLLVVT----------IALCASQR-NGYRR 1857
            |.:    ...|.:..|.|.:|:..       .|..|...|:          :|...:|. :|.|.
Zfish  2035 AMD----QGSPPQSSLGVVIIYVKEQDYKGIRFSRTARDVSLQENADKGTVVAQAQAQHPDGTRD 2095

  Fly  1858 QLRAAKVNIFRG--HSSMSLQDAQEPATRVPNTNKHSVQGSNPIWLKGYDNE-------WFKSEE 1913
            .:   ..:||.|  :.|.|:..         ||.:..||.||     |.|.|       ..|:|.
Zfish  2096 GI---NYSIFSGNKYHSFSISS---------NTGEIWVQSSN-----GLDFEDTPRLRLVVKAET 2143

  Fly  1914 SGSIGGHDSLDDNFLAV--ATQDMHETLKGTAKLFNNSNDLNRHFNLYNQIDKM 1965
            :.|        .:|:||  ..||:              ||....|.|.|.:..|
Zfish  2144 TSS--------SSFMAVNLILQDV--------------NDNRPRFQLQNYVTYM 2175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 27/99 (27%)
Cadherin_repeat 179..276 CDD:206637 32/99 (32%)
Cadherin_repeat 287..388 CDD:206637 31/104 (30%)
Cadherin_repeat 397..506 CDD:206637 25/113 (22%)
Cadherin_repeat 514..617 CDD:206637 34/107 (32%)
Cadherin_repeat 625..742 CDD:206637 44/305 (14%)
Cadherin_repeat 751..853 CDD:206637 29/116 (25%)
Cadherin_repeat 865..976 CDD:206637 33/112 (29%)
Cadherin_repeat 985..1080 CDD:206637 28/103 (27%)
Cadherin_repeat 1090..1191 CDD:206637 30/108 (28%)
CA 1221..1302 CDD:214520 20/97 (21%)
Cadherin_repeat 1312..1409 CDD:206637 29/96 (30%)
Cadherin_repeat 1418..>1502 CDD:206637 21/83 (25%)
Cadherin_repeat 1617..1710 CDD:206637 30/97 (31%)
dchs1bXP_021327955.1 Cadherin_repeat 50..140 CDD:206637 13/53 (25%)
Cadherin_repeat 150..252 CDD:206637 29/105 (28%)
Cadherin_repeat 261..359 CDD:206637 34/103 (33%)
Cadherin_repeat 375..469 CDD:206637 32/103 (31%)
Cadherin_repeat 478..576 CDD:206637 25/112 (22%)
Cadherin_repeat 585..683 CDD:206637 34/106 (32%)
Cadherin_repeat 692..783 CDD:206637 8/90 (9%)
Cadherin_repeat 796..891 CDD:206637 17/94 (18%)
Cadherin_repeat 905..995 CDD:206637 18/89 (20%)
Cadherin_repeat 1005..1110 CDD:206637 30/119 (25%)
Cadherin_repeat 1123..1213 CDD:206637 32/110 (29%)
Cadherin_repeat 1228..1316 CDD:206637 26/89 (29%)
Cadherin_repeat 1336..1429 CDD:206637 28/97 (29%)
Cadherin_repeat 1437..1540 CDD:206637 22/117 (19%)
Cadherin_repeat 1550..1643 CDD:206637 29/95 (31%)
Cadherin_repeat 1652..1746 CDD:206637 28/134 (21%)
Cadherin_repeat 1754..1850 CDD:206637 18/96 (19%)
Cadherin_repeat 1858..1955 CDD:206637 32/110 (29%)
Cadherin_repeat 1977..2054 CDD:206637 18/93 (19%)
Cadherin_repeat 2070..2162 CDD:206637 28/130 (22%)
Cadherin_repeat 2171..2267 CDD:206637 1/5 (20%)
Cadherin_repeat 2274..2358 CDD:206637
Cadherin_repeat 2376..2472 CDD:206637
Cadherin_repeat 2480..2589 CDD:206637
Cadherin_repeat 2597..2692 CDD:206637
Cadherin_repeat 2702..2796 CDD:206637
Cadherin_repeat 2807..2904 CDD:206637
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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