Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021327955.1 | Gene: | dchs1b / 553300 | ZFINID: | ZDB-GENE-050208-41 | Length: | 3298 | Species: | Danio rerio |
Alignment Length: | 2329 | Identity: | 570/2329 - (24%) |
---|---|---|---|
Similarity: | 893/2329 - (38%) | Gaps: | 613/2329 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 GNGIDS---MDYKKVRLKGQRR--RSFSSYISSISIQVIILTTLISLVA---SNRPPRFAIDGQS 67
Fly 68 EIVLRLKESPETKVGTLIYTLKGYDPDNDPLT---FGKRNSHDSEIIRIENTGGNEAKIFL---- 125
Fly 126 AKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFL-LLVEDINDNVPTFLPYQ-NAI---EIPEGS 185
Fly 186 APGVVSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQGKGILRLQKELDYERKSLYQLRVL 250
Fly 251 AIDRANQGPINTGTAAILVKVKDLEDQPPE----FVEVQAVARIAEDAPVGTKVLRVRAIDGDRG 311
Fly 312 INNPIAYSLEAND-LFDINPHTGIVHTL---TKLDREEQSDQVNGAHILRISATELSKSNTQMAP 372
Fly 373 TTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLF 437
Fly 438 LDPPNDLFEIVPELAVNEANFMLR-----VKNSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQ 497
Fly 498 IFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNL 562
Fly 563 NPITGVITIKQAG----GTAFDR-EIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFP 622
Fly 623 QRQYETKL-----------------------------------------------------LENQ 634
Fly 635 AEFETPLQLEARDAD-------------------------------------LNGTE-------- 654
Fly 655 ----NSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSFDFEE------------------------- 690
Fly 691 ---------------------------------LVDGSSRRSDPYTGGSF--------------- 707
Fly 708 --------------SIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPED 758
Fly 759 LPGGSSVLQVTAIDRD------GSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPD--- 814
Fly 815 ------LTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVN-NKPPVLKEMPALQILENTP 872
Fly 873 VGTLVYRIQATDLDH--KAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVDSIEGTLKVVKL 935
Fly 936 LDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQ-------SITENS 993
Fly 994 INGAMIVNVLASDVD--KNRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRA 1056
Fly 1057 TDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTIS------ENAAPGTRVATLQAGDADSGD 1115
Fly 1116 F-GKITFL-MDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAF 1178
Fly 1179 KQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITR---GN 1240
Fly 1241 KD--------GMFEL-RQIDAWNAQIFASKSLRNRYGNYSLTITTRDMGLPAN-----IVHNTLD 1291
Fly 1292 ICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMF 1356
Fly 1357 EVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISV 1421
Fly 1422 NFTEHSDPGSERIKLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELD 1486
Fly 1487 REVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNRLGGIVHNQQFGYDRFKHSRQLRSTESN 1551
Fly 1552 EYGP---------------EDAELLSYEA------------YDSSQEDP---------TGGLATT 1580
Fly 1581 H---------------------PELDSTVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKF 1624
Fly 1625 MRVEATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLN--FDPQKGMKGYF 1687
Fly 1688 DFVVLANDTS---GMKDVAHVFIYLLREDQKVRFVFRLQPDELRSRVDSFRDTLSNITESIVNID 1749
Fly 1750 EIKVHENKD----GSVDKTKTDLYMHLVEREDNSIYEVSEVLKLIDSHIESLNGLFKELNVLDTQ 1810
Fly 1811 AAEAQLLTAGPSRGPLFVWLIFTN-------LFLATLLVVT----------IALCASQR-NGYRR 1857
Fly 1858 QLRAAKVNIFRG--HSSMSLQDAQEPATRVPNTNKHSVQGSNPIWLKGYDNE-------WFKSEE 1913
Fly 1914 SGSIGGHDSLDDNFLAV--ATQDMHETLKGTAKLFNNSNDLNRHFNLYNQIDKM 1965 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 27/99 (27%) |
Cadherin_repeat | 179..276 | CDD:206637 | 32/99 (32%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 31/104 (30%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 25/113 (22%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 34/107 (32%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 44/305 (14%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 29/116 (25%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 33/112 (29%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 28/103 (27%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 30/108 (28%) | ||
CA | 1221..1302 | CDD:214520 | 20/97 (21%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 29/96 (30%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 21/83 (25%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 30/97 (31%) | ||
dchs1b | XP_021327955.1 | Cadherin_repeat | 50..140 | CDD:206637 | 13/53 (25%) |
Cadherin_repeat | 150..252 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 261..359 | CDD:206637 | 34/103 (33%) | ||
Cadherin_repeat | 375..469 | CDD:206637 | 32/103 (31%) | ||
Cadherin_repeat | 478..576 | CDD:206637 | 25/112 (22%) | ||
Cadherin_repeat | 585..683 | CDD:206637 | 34/106 (32%) | ||
Cadherin_repeat | 692..783 | CDD:206637 | 8/90 (9%) | ||
Cadherin_repeat | 796..891 | CDD:206637 | 17/94 (18%) | ||
Cadherin_repeat | 905..995 | CDD:206637 | 18/89 (20%) | ||
Cadherin_repeat | 1005..1110 | CDD:206637 | 30/119 (25%) | ||
Cadherin_repeat | 1123..1213 | CDD:206637 | 32/110 (29%) | ||
Cadherin_repeat | 1228..1316 | CDD:206637 | 26/89 (29%) | ||
Cadherin_repeat | 1336..1429 | CDD:206637 | 28/97 (29%) | ||
Cadherin_repeat | 1437..1540 | CDD:206637 | 22/117 (19%) | ||
Cadherin_repeat | 1550..1643 | CDD:206637 | 29/95 (31%) | ||
Cadherin_repeat | 1652..1746 | CDD:206637 | 28/134 (21%) | ||
Cadherin_repeat | 1754..1850 | CDD:206637 | 18/96 (19%) | ||
Cadherin_repeat | 1858..1955 | CDD:206637 | 32/110 (29%) | ||
Cadherin_repeat | 1977..2054 | CDD:206637 | 18/93 (19%) | ||
Cadherin_repeat | 2070..2162 | CDD:206637 | 28/130 (22%) | ||
Cadherin_repeat | 2171..2267 | CDD:206637 | 1/5 (20%) | ||
Cadherin_repeat | 2274..2358 | CDD:206637 | |||
Cadherin_repeat | 2376..2472 | CDD:206637 | |||
Cadherin_repeat | 2480..2589 | CDD:206637 | |||
Cadherin_repeat | 2597..2692 | CDD:206637 | |||
Cadherin_repeat | 2702..2796 | CDD:206637 | |||
Cadherin_repeat | 2807..2904 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |