DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and DCHS2

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:NP_001345164.1 Gene:DCHS2 / 54798 HGNCID:23111 Length:3371 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637
Cadherin_repeat 179..276 CDD:206637
Cadherin_repeat 287..388 CDD:206637
Cadherin_repeat 397..506 CDD:206637
Cadherin_repeat 514..617 CDD:206637
Cadherin_repeat 625..742 CDD:206637
Cadherin_repeat 751..853 CDD:206637
Cadherin_repeat 865..976 CDD:206637
Cadherin_repeat 985..1080 CDD:206637
Cadherin_repeat 1090..1191 CDD:206637
CA 1221..1302 CDD:214520
Cadherin_repeat 1312..1409 CDD:206637
Cadherin_repeat 1418..>1502 CDD:206637
Cadherin_repeat 1617..1710 CDD:206637
DCHS2NP_001345164.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
Cadherin_repeat 70..163 CDD:206637
Cadherin_repeat 176..292 CDD:206637
Cadherin_repeat 300..409 CDD:206637
Cadherin_repeat 423..534 CDD:206637
Cadherin_repeat 543..659 CDD:206637
Cadherin_repeat 667..767 CDD:206637
Cadherin_repeat 775..866 CDD:206637
Cadherin_repeat 881..975 CDD:206637
Cadherin_repeat 985..1074 CDD:206637
Cadherin_repeat 1088..1187 CDD:206637
Cadherin_repeat 1195..1290 CDD:206637
Cadherin_repeat 1302..1394 CDD:206637
Cadherin_repeat 1412..1506 CDD:206637
Cadherin_repeat 1515..1616 CDD:206637
Cadherin_repeat 1625..1719 CDD:206637
Cadherin_repeat 1729..1825 CDD:206637
Cadherin_repeat 1833..1929 CDD:206637
Cadherin_repeat 1938..2034 CDD:206637
Cadherin_repeat 2042..2129 CDD:206637
CA 2162..2240 CDD:214520
Cadherin_repeat 2246..2343 CDD:206637
Cadherin_repeat 2353..2443 CDD:206637
Cadherin_repeat 2452..2543 CDD:206637
Cadherin_repeat 2553..2661 CDD:206637
Cadherin_repeat 2669..2765 CDD:206637
Cadherin_repeat 2778..2868 CDD:206637
Cadherin_repeat 2884..2978 CDD:206637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3117..3141
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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