DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and Cad87A

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster


Alignment Length:2105 Identity:567/2105 - (26%)
Similarity:886/2105 - (42%) Gaps:400/2105 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ISIQVIILTTLISLVASNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPDNDPLTFGKR 103
            :.:.:|.|...::...:|.||.|. ...:.|:|    .....|||:::.|:.|||:..|:|:|  
  Fly     5 LGLLMICLGLTLAKGETNLPPVFT-QTLNNIIL----YENVTVGTVVFRLEAYDPEGSPVTYG-- 62

  Fly   104 NSHDSEIIRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTD-----SHYSDHNYVTQSFLLLVE 163
             :..::...::...||   |.|.|.||||.:|....::::.|     ......|.|......::.
  Fly    63 -AIGADHFSVDPVSGN---ITLIKPLDREEKDTLKFLVSIRDRVDPEGESERDNVVEVPITFIIL 123

  Fly   164 DINDNVPTF--LPYQNAIEIPEGSAPGVVSTLEATDADEGAYGQVV----------------YYL 210
            |:|||.|.|  .||:  .::.|.:|.|.....:.|..|....|:.:                :.|
  Fly   124 DLNDNPPEFQNTPYE--ADVNEDAAVGTTIFDKITVKDRDIVGESLDLKCLPQQQSPEACRKFRL 186

  Fly   211 QELDGDNDVFSIATHQGKGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLE 275
            ..:..|..:...|       :.|...|:|.::.:|..::.|.|    ||..|.| ....:|||::
  Fly   187 HIIKRDATILEAA-------VVLNDTLNYNQRMVYHFQIEATD----GPHKTQT-TFEARVKDVQ 239

  Fly   276 DQPPEFVEVQAVARIAEDAPVGTKVLRVRAIDGDRGINNPIAYSLEA--NDLFDINPHTGIVHTL 338
            |:||.| :......|.||:|:.|.||.|.|.|||.|....|.|.|..  ||.|.::..||.:.|.
  Fly   240 DKPPVF-QGSLSTVIDEDSPINTLVLTVHARDGDTGEPRKIVYDLRTNPNDYFLLDAQTGELRTA 303

  Fly   339 TKLDREEQSDQVNGAHILRISATELSKSNTQMAPTTVRT-EVTVIVSDVNDEIPTFGETVYRCEV 402
            ..||||...|. .|...|.|.|.||........|.|..| :.||.:.||||..|.|....|...:
  Fly   304 KPLDREALEDS-TGIISLVIRARELVNGVPSDDPLTSATAKATVTIRDVNDSPPVFNHKEYSVSL 367

  Fly   403 NENAQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLFLDPPNDLFEIVPELAVNEANFMLRVKNSKS 467
            .||....||| .:|..|.    |.|.|.|..|.|.||..:.:|::.|:|....:...:||.|. :
  Fly   368 LENTLPGTPL-ALDMSVS----DADVGINSKFALRLDDVSGVFDVEPKLVTGYSQVNIRVANG-T 426

  Fly   468 LDFEQFTEVNFTIF--AREVDEPSRWSS-AHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTII 529
            ||:|...:..|.:.  |.|.|...|.|| |.:.:.:.|.|||.|.|.|..|:|||.|.:.....|
  Fly   427 LDYENPNQRKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSEAALPGQYI 491

  Fly   530 THVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNLNPITGVITI----------------------- 571
            ..:.|.|||||.||..|||| :|.|..|.|.::|..||||::                       
  Fly   492 ATITARDVDSGSYGDSGIRY-SLSGTGAELFHVNEQTGVISLANCHDNGESNRRERRDLNEDEHV 555

  Fly   572 -------------------------------------KQAGG----------------------- 576
                                                 :||..                       
  Fly   556 EEDDGEGHLEMLSMEAATREIGTEPTVQYTLITQAPEEQASSVPLPAPVPHAAPSGVPAATANDD 620

  Fly   577 ----TAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQYETKLLENQAEF 637
                |..|.|..:.::|:.:|.|:.|:|:.:...:.:.:.|.||:.|......|...:.|....|
  Fly   621 KAPQTCLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYRASVDEGAVVF 685

  Fly   638 ETPLQLEARDADLNGTENSQVTYEI-----VEGLYRSNFTIDPQSG--LLRPVHSFDFEELVDGS 695
            ::||.::|||||    ..|:::|.|     ||.:    |.||.::|  ::||..:.|...|    
  Fly   686 DSPLIVKARDAD----TMSRISYRIRGSEQVESI----FDIDRETGQIIIRPNATLDVTNL---- 738

  Fly   696 SRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLP 760
                           ..|.|:.|.::...:.:....|.|.|:|||::.|.|:|..|:..|.|:..
  Fly   739 ---------------NSDQLIFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEENSE 788

  Fly   761 GGSSVLQVTAIDRDGSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTL 825
            .|:||.:|.|.|.| :..|..:.||||.|:.|.|.|...||.:.|:...:.|      :|:.|.|
  Fly   789 IGTSVERVHATDLD-TGKNAELRYRIQQGSFDDFGIVETTGEVFVSRKLDFD------RRNTYQL 846

  Fly   826 SVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVLKEMPALQILE---NTPVGTLVYRIQATDLD- 886
            .:.|.|  .|...|..|.|:.|::|:.|:|.|..  :||.|..|   :.|.|.|||.:.|.|.| 
  Fly   847 QIQASD--QGTPSLTGTATLTINVQNSNDKDPYF--VPATQHAEVRADAPPGQLVYTLIALDPDV 907

  Fly   887 --HKAILRYKLNPEHCEGRTEEGALVKSSE----YD-FLGAFEVDSIEGTLKVVKLLDRERVEHI 944
              |.|:        ...|..:..|:.|..:    || |...|:: |..|.:.|.|.|||.....:
  Fly   908 ANHNAL--------EFAGTDDITAIDKEGKELPHYDQFKEYFKI-SRNGKVSVNKQLDRNLFAVM 963

  Fly   945 KLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPF------YRQSITENSINGAMIVNVL 1003
            ::.:.|.|..|...:| ..|.|.||::|.|.|.|:|..|:      .:..:.|....|.::..:.
  Fly   964 RINVLVTDSTAPNVQQ-GRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMVEEQPVGTVLTTLQ 1027

  Fly  1004 ASDVDKNRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSSLV 1068
            |:|.|.:     ..|.|.:......::..:|.|...:::|:|..:.:.|.|..:|:|:||.::..
  Fly  1028 ANDEDSS-----IGEFNISDNDYFAINQTSGMIYTIARLDYEVVKEVKFQVTVSDTGVPALTATA 1087

  Fly  1069 DVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDADSGDFGKITFLMDRISSQGK-F 1132
            ||.:.:::.|||:|.|......:.::||:..||....::|.|.|.|.||:||:.:  |....| |
  Fly  1088 DVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGVFGEITYTL--IGENNKYF 1150

  Fly  1133 TIDADTGVLTVADR--LDRESKDSYNLVIEAWDNYQFGFLAGESRNAFKQVFISILDENDNPPEV 1195
            :|||.||.:.||:.  ||||......|.:.|.|...    |...::|...:.|:|||.|||.|..
  Fly  1151 SIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAP----AAVQKSATATIHINILDVNDNAPVF 1211

  Fly  1196 --DLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITRGNKDGMFELRQIDAWNAQIF 1258
              |:..|.|.....::....:..:...|.|:..  .|.:.:.||.||:.|:|:|   ||.:..::
  Fly  1212 TRDVYNSTVAENAAYQPPAALLQVQAIDQDEGL--YGDVRYIITAGNEMGLFKL---DAQSGIVY 1271

  Fly  1259 ASKSLRNRYGNYSLTITTRDMGLPANIVHNT-LDICVSDFNDHAPVFVRP-LHNTTVRIP-ENAT 1320
            .::||..::|.|.|||:.||......:...| ..|.|...|.|.|.||.| |.|.|:.|| :...
  Fly  1272 PAQSLSGKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEFVIPALSNATIEIPGDIVQ 1336

  Fly  1321 VGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKM--FEVDGSTGELFLKEQLNREKQKIHEIRI 1383
            ...|:|...|.|.|..:|..|.|.|:.:.....:.  |::|..||||..|.||||:.:..::|.:
  Fly  1337 PDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTGEFKIDEVTGELRAKTQLNRKNRANYDIIL 1401

  Fly  1384 EAYDQGLPTSLSSDLDLTIYVRNVNDYEPQF--MVNEISVNFTEHSDPGSERIKLPDTIDKDQLE 1446
            .|.|.|.|...|..| |::.:.:.|:..|:|  ..|...|:..|:|   ...:|:      ..::
  Fly  1402 VARDAGNPPFESLRL-LSVSIVDANENRPEFPDASNPYKVSINENS---GRDVKI------GHIQ 1456

  Fly  1447 LDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRATENCRNDSISGG 1511
            ....:.....:.|:::.|||.|.|.:|..|..:..::.||||....:|||:.|  :.:.|.....
  Fly  1457 AASRSKHNRDIFYYMLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILA--SIKADLHISE 1519

  Fly  1512 EKRRRMGIEINNRLGGIVHNQQFGYDRFKHSRQLRSTESNEYGPEDAELLSYEAYDSSQEDPTGG 1576
            |:|....|:..||                                                    
  Fly  1520 EERASFSIKTLNR---------------------------------------------------- 1532

  Fly  1577 LATTHPELDSTVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIG 1641
                    |:||.||.:.|||:|||||.|...|:..|:..||..|.....|.|||||:|.|.:|.
  Fly  1533 --------DNTVAKVAITVLDVNDNPPVFEKPIYYAGVNANAKMGAAITLVNATDADQGKNAKIE 1589

  Fly  1642 Y-------YQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLNFDPQKGMKGYFDFVVLANDTSGM 1699
            :       |:.|..:.|.|     :..:||.:.|: |.:..|....:..:..|:..::|.:....
  Fly  1590 FMIVASNLYKFGATKSTGS-----IVPSPFAISQD-GRISANTIMAEYNQDRFELEIVARELEQP 1648

  Fly  1700 KDVA--HVFIYLLREDQKVRFVFRLQPDELRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVD 1762
            :..|  .|.|::....|.||.:....|:|:....:.....|.|.|:..:.:|||:.|.:..|.:.
  Fly  1649 QSSASTKVNIWVFDGTQLVRVILSRPPEEVYQEQEEIIAELRNATQHRIIVDEIRFHLDSIGRIR 1713

  Fly  1763 KTKTDLYMHLVEREDNSIYEVSEVLKLIDSHIESLNGLFKEL---NVLDTQAA----EAQLLTAG 1820
            ....|||.|.|:.:...|..|.|:||.||.:.:.|...:...   ||:....|    |..|..||
  Fly  1714 MDWCDLYFHAVDPQTQQIAPVDEILKDIDRNYDYLKDYYAGFAIENVVPAYIAIVQDEFDLAVAG 1778

  Fly  1821 PSRGPLFVWLIFTNLFLATLLVVTIALCASQRN-----GYRRQLRAAKVNIFRGHSSMSLQDAQE 1880
                  .|.|:.. ||:..:..:.:..|....|     ..||:....|..|        ::|.  
  Fly  1779 ------LVALVIV-LFVGVISFIVLCCCLKHWNLSVPVETRRKEALIKKQI--------IEDL-- 1826

  Fly  1881 PATRVPNTNKHSVQGSNPIW----LKGYDNEWF------------KSEESGSIGGHDSLDDNFLA 1929
                  ||.:      ||:|    ||.|:.:..            .||..|.:....||:.    
  Fly  1827 ------NTTE------NPLWIEQKLKLYEEQELTMQVFSEPDHISNSEAPGHLDHRSSLEQ---- 1875

  Fly  1930 VATQDMHETLKGTAKLFNNSNDLNR 1954
              ...:.:|:..|.......|:.||
  Fly  1876 --VHHVGQTVDNTYATIQPRNNQNR 1898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 25/96 (26%)
Cadherin_repeat 179..276 CDD:206637 22/112 (20%)
Cadherin_repeat 287..388 CDD:206637 40/103 (39%)
Cadherin_repeat 397..506 CDD:206637 35/111 (32%)
Cadherin_repeat 514..617 CDD:206637 39/189 (21%)
Cadherin_repeat 625..742 CDD:206637 32/123 (26%)
Cadherin_repeat 751..853 CDD:206637 34/101 (34%)
Cadherin_repeat 865..976 CDD:206637 36/121 (30%)
Cadherin_repeat 985..1080 CDD:206637 20/94 (21%)
Cadherin_repeat 1090..1191 CDD:206637 36/103 (35%)
CA 1221..1302 CDD:214520 26/81 (32%)
Cadherin_repeat 1312..1409 CDD:206637 31/99 (31%)
Cadherin_repeat 1418..>1502 CDD:206637 20/83 (24%)
Cadherin_repeat 1617..1710 CDD:206637 26/101 (26%)
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 27/104 (26%)
Cadherin_repeat 136..240 CDD:206637 24/117 (21%)
Cadherin_repeat 248..353 CDD:206637 40/105 (38%)
Cadherin_repeat 362..468 CDD:206637 35/111 (32%)
Cadherin_repeat 476..>533 CDD:206637 27/57 (47%)
E_set <627..667 CDD:298831 10/39 (26%)
CA 692..772 CDD:214520 27/106 (25%)
Cadherin_repeat 778..873 CDD:206637 34/103 (33%)
Cadherin_repeat 882..994 CDD:206637 36/121 (30%)
Cadherin_repeat 1015..1099 CDD:206637 20/88 (23%)
Cadherin_repeat 1108..1207 CDD:206637 36/104 (35%)
Cadherin_repeat 1215..1314 CDD:206637 27/103 (26%)
Cadherin_repeat 1327..1427 CDD:206637 32/100 (32%)
Cadherin_repeat 1437..1549 CDD:206637 35/182 (19%)
Cadherin_repeat 1557..1662 CDD:206637 28/110 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9126
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D2512at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24028
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

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